Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3591
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              27   0.16 
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    24   1.1  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    24   1.1  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              23   2.6  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              23   2.6  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   2.6  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   3.5  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   4.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   4.6  

>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 195 ILVNE*R*AFLDEPLSNLSIEECTKNNSVQTVIRATKAIKSIG 323
           +++ E    FLDE   N  I EC+  +     +++ K +K IG
Sbjct: 82  VVIREIAEIFLDENGVNKLITECSAISDADLAVKSAKLLKCIG 124


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/26 (26%), Positives = 18/26 (69%)
 Frame = +3

Query: 528 LIFIALTVCPKKVVLNMMYNKPKSRQ 605
           +I +++++C   VVLN+ +  P++ +
Sbjct: 315 MILVSISICVTVVVLNVHFRSPQTHK 340


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 7/26 (26%), Positives = 18/26 (69%)
 Frame = +3

Query: 528 LIFIALTVCPKKVVLNMMYNKPKSRQ 605
           +I +++++C   VVLN+ +  P++ +
Sbjct: 315 MILVSISICVTVVVLNVHFRSPQTHK 340


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 198 LVNE*R*AFLDEPLSNLSIEECTKNNSVQTVIRATKAIKSIG 323
           +V E    +LDE +    + EC+  +     IR  K +K  G
Sbjct: 83  IVQELTSIYLDENVIKKLVAECSVISDANIYIRFNKLVKCFG 124


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +3

Query: 198 LVNE*R*AFLDEPLSNLSIEECTKNNSVQTVIRATKAIKSIG 323
           +V E    +LDE +    + EC+  +     IR  K +K  G
Sbjct: 83  IVQELTSIYLDENVIKKLVAECSVISDANIYIRFNKLVKCFG 124


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 528 LIFIALTVCPKKVVLNMMYNKPKSRQ 605
           +I + L+V    V+LN+ Y KP + +
Sbjct: 306 MILVGLSVVITIVILNVHYRKPSTHK 331


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 195 ILVNE*R*AFLDEPLSNLSIEECTKNNSVQTVIRATKAIK 314
           ++V E    +LDE   N  I EC+  +     ++++K IK
Sbjct: 82  VVVREIAEIYLDENEVNKLITECSAISDADIHLKSSKLIK 121


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 222 FLDEPLSNLSIEE 260
           F+DE  +NLSIEE
Sbjct: 344 FVDESANNLSIEE 356


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 222 FLDEPLSNLSIEE 260
           F+DE  +NLSIEE
Sbjct: 359 FVDESANNLSIEE 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,372
Number of Sequences: 438
Number of extensions: 3439
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)