Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3585
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   3.3  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   3.3  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   3.3  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.6  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 11/37 (29%), Positives = 14/37 (37%)
 Frame = +3

Query: 249 GLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLL 359
           G CL    +F    I    +   K C +I  Q  D L
Sbjct: 53  GSCLTPDSVFFKSHITEAFQTQCKKCTEIQKQNLDKL 89


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -1

Query: 169 IACLTHLCLCLPSDILYVYEIW-LNRI 92
           I CLT +CL   S I+    +W +N+I
Sbjct: 385 IQCLTVVCLAFWSFIVSTILLWFINKI 411


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 11/37 (29%), Positives = 14/37 (37%)
 Frame = +3

Query: 249 GLCLKSREIFLSQPILLELEAPLKMCGDIHGQYYDLL 359
           G CL    +F    I    +   K C +I  Q  D L
Sbjct: 53  GSCLTPDSVFFKSHITEAFQTQCKKCTEIQKQNLDKL 89


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -3

Query: 239 YFRQLNIHTRLL 204
           YF++ N++TR+L
Sbjct: 474 YFKEANLNTRML 485


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/12 (50%), Positives = 11/12 (91%)
 Frame = -3

Query: 239 YFRQLNIHTRLL 204
           YF++ N++TR+L
Sbjct: 474 YFKEANLNTRML 485


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,480
Number of Sequences: 438
Number of extensions: 2581
Number of successful extensions: 48
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)