Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3502
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   4.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   4.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.3  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   5.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   5.3  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    21   9.2  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    21   9.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   9.2  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   9.2  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 221 EKLVPACGIRTPLHRYMRMHPDVL 292
           E  +P C +  PL++Y+++  +V+
Sbjct: 309 ELQLPGCEVLCPLYKYLQLIENVI 332


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = +2

Query: 221 EKLVPACGIRTPLHRYMRMHPDVL 292
           E  +P C +  PL++Y+++  +V+
Sbjct: 324 ELQLPGCEVLCPLYKYLQLIENVI 347


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 554 VKLLKYRLNQMPFHSSI 604
           +K+ +YRLN  PF+  I
Sbjct: 488 IKIRQYRLNHKPFNFHI 504


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 554 VKLLKYRLNQMPFHSSI 604
           +K+ +YRLN  PF+  I
Sbjct: 488 IKIRQYRLNHKPFNFHI 504


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 560 LLKYRLNQMPFHSSI*FIIVTPQYMY 637
           LL Y +  + FHS +   ++ P +MY
Sbjct: 451 LLSYFIEPIYFHSIVLGSLLNPSHMY 476


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 637 IHILWRHYNKLY 602
           +HILW  Y K++
Sbjct: 101 LHILWTSYKKVF 112


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 637 IHILWRHYNKLY 602
           +HILW  Y K++
Sbjct: 84  LHILWTSYKKVF 95


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 667 VVNCMTIIYYIHIL 626
           V++C T IYYI IL
Sbjct: 106 VLSCWTNIYYIIIL 119


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 667 VVNCMTIIYYIHIL 626
           V++C T IYYI IL
Sbjct: 159 VLSCWTNIYYIIIL 172


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,876
Number of Sequences: 438
Number of extensions: 5396
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)