Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3496
         (329 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        25   0.24 
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        25   0.24 
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        25   0.24 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.24 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   2.2  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   6.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    20   8.9  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 325 PALNRATIQGHSFSCALCPPP 263
           PA+NR   + +S  CALC  P
Sbjct: 205 PAINRRLKETYSNMCALCEKP 225


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 325 PALNRATIQGHSFSCALCPPP 263
           PA+NR   + +S  CALC  P
Sbjct: 205 PAINRRLKETYSNMCALCEKP 225


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 325 PALNRATIQGHSFSCALCPPP 263
           PA+NR   + +S  CALC  P
Sbjct: 205 PAINRRLKETYSNMCALCEKP 225


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.24
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 3/58 (5%)
 Frame = +1

Query: 1   TRLTTQRQPIHLQWVSRNHHKLNQHHPL---LLGEQSRPVPPSLQRNXHGLQHXQRXR 165
           T  TT    I  + + R+HH  N HH L    + +  RP     Q+     Q  +  R
Sbjct: 124 TATTTATGLIKQETLQRHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQEERR 181


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = -3

Query: 120 AWWYWAA 100
           AWW+W A
Sbjct: 28  AWWFWTA 34


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 6/20 (30%), Positives = 13/20 (65%)
 Frame = +1

Query: 46  SRNHHKLNQHHPLLLGEQSR 105
           S+ HH+++  HP +  +Q +
Sbjct: 166 SQMHHQMHTQHPHMQPQQGQ 185


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 273 VHHQCAXHXXHRMCY 229
           +HH  A H  HR  Y
Sbjct: 155 LHHGMAYHRGHRKDY 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,145
Number of Sequences: 438
Number of extensions: 1191
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)