Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3489
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   4.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   4.1  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    22   4.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.5  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 112  HVPGRSHAESAGSGPDHLLPAAAECVPY 195
            H      A + G GPD +   A +  PY
Sbjct: 1670 HKVALQQAANTGGGPDKIPETAEDISPY 1697


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +1

Query: 112  HVPGRSHAESAGSGPDHLLPAAAECVPY 195
            H      A + G GPD +   A +  PY
Sbjct: 1666 HKVALQQAANTGGGPDKIPETAEDISPY 1693


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 303 TRLFRVRSISFLISLTINTLDVRPTR 226
           TRL+       L+ ++ N  DV+ TR
Sbjct: 105 TRLYEFSDNELLVHISTNKSDVKATR 130


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 122 AAVTLSLLGQALIIYF 169
           ++V LSLL  ALI+YF
Sbjct: 12  SSVFLSLLIPALILYF 27


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 60   RQRVEHVEQHEARER 16
            +Q+ +  +QH+ARER
Sbjct: 1225 QQQQQQQQQHQARER 1239


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,973
Number of Sequences: 438
Number of extensions: 2654
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)