Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-3473
(383 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0468 - 21083754-21083869,21083986-21084069,21085633-210859... 36 0.011
04_04_0704 + 27401683-27401818,27402761-27402937,27402983-274030... 35 0.025
02_05_0175 + 26490186-26490303,26490954-26491184,26491326-264914... 31 0.24
06_01_0576 - 4073261-4073821,4073891-4074145 31 0.31
07_03_0298 + 16384922-16385383,16387540-16388562 30 0.55
03_01_0007 + 79202-79433,80426-80713,80790-80870,81090-81191,816... 30 0.72
07_03_0294 + 16342606-16343100,16343359-16344120 29 1.7
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 29 1.7
11_05_0013 + 18383235-18383702,18385570-18386571 28 2.2
10_08_0509 + 18419815-18422150,18422249-18422291,18423154-184234... 28 2.2
11_04_0391 + 17127309-17127449,17127886-17127950,17129209-171293... 28 2.9
05_02_0120 - 6797954-6798970,6799466-6799951 28 2.9
02_01_0147 - 1048117-1048329,1048522-1049682,1049783-1050070 28 2.9
11_01_0196 - 1547373-1549859 27 3.8
06_03_0543 + 21967787-21970261 27 3.8
01_06_0270 + 28048449-28048577,28048915-28048978,28049537-280496... 27 3.8
01_06_1760 - 39697079-39697162,39697280-39697340,39697415-396974... 27 5.1
12_02_1109 + 26151421-26153601 27 6.7
11_08_0024 + 27747449-27747940,27748141-27750177 27 6.7
07_03_1692 - 28733184-28733980,28734306-28734373,28734481-287345... 27 6.7
06_03_0691 + 23552437-23552914,23555168-23555953,23556045-235561... 27 6.7
05_05_0018 - 21547649-21547875,21547973-21548187,21548831-215490... 27 6.7
04_03_0789 + 19660713-19660896,19661405-19662027 27 6.7
02_05_1327 - 35718908-35719270,35719537-35719953,35720183-35720557 27 6.7
10_08_0511 + 18435745-18436499,18436624-18436742,18436788-184373... 26 8.9
10_08_0495 - 18318028-18320399,18322450-18322981,18323097-183232... 26 8.9
04_03_0132 - 11647230-11647432,11647520-11647982,11648159-116482... 26 8.9
03_06_0388 + 33564096-33564485,33564642-33564812,33565125-335651... 26 8.9
01_06_0481 - 29646245-29646371,29646474-29646556,29646672-296467... 26 8.9
>06_03_0468 -
21083754-21083869,21083986-21084069,21085633-21085920,
21087525-21087687
Length = 216
Score = 35.9 bits (79), Expect = 0.011
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +1
Query: 295 GQATVVLNVYDMYWTNWYTAGAGLGVFHS 381
G TVVLNVYD+ N Y GLG+FHS
Sbjct: 23 GAYTVVLNVYDLTPLNNYLHWCGLGIFHS 51
>04_04_0704 +
27401683-27401818,27402761-27402937,27402983-27403048,
27403139-27403219,27404089-27404207
Length = 192
Score = 34.7 bits (76), Expect = 0.025
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 295 GQATVVLNVYDMYWTNWYTAGAGLGVFHS 381
G A+VV+NVYD+ N Y GLG+FHS
Sbjct: 14 GAASVVVNVYDLTPMNNYLYWFGLGIFHS 42
>02_05_0175 +
26490186-26490303,26490954-26491184,26491326-26491406,
26491557-26491684
Length = 185
Score = 31.5 bits (68), Expect = 0.24
Identities = 17/30 (56%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 295 GQAT-VVLNVYDMYWTNWYTAGAGLGVFHS 381
G AT V+LNVYD+ N Y G GVFHS
Sbjct: 7 GTATPVLLNVYDLTPANDYLYWLGFGVFHS 36
>06_01_0576 - 4073261-4073821,4073891-4074145
Length = 271
Score = 31.1 bits (67), Expect = 0.31
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 307 VVLNVYDMYWTNWYTAGAGLGVFHS 381
V LNVYD+ N Y GLGV+HS
Sbjct: 46 VYLNVYDVTPANGYARWLGLGVYHS 70
>07_03_0298 + 16384922-16385383,16387540-16388562
Length = 494
Score = 30.3 bits (65), Expect = 0.55
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +3
Query: 246 LH-VAAIAPFRLPAPSARTGDRGPQRLRYVLDELVHCGRGSG 368
LH ++ + P+ LP P+ R DR QRL + E++ R SG
Sbjct: 208 LHLISTMLPY-LPTPAHRRRDRARQRLGEIFTEVIRSRRNSG 248
>03_01_0007 +
79202-79433,80426-80713,80790-80870,81090-81191,
81677-81813
Length = 279
Score = 29.9 bits (64), Expect = 0.72
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 301 ATVVLNVYDMYWTNWYTAGAGLGVFHS 381
A + LN+YD+ N Y GLG+FHS
Sbjct: 48 AELYLNIYDISPINHYLYWFGLGIFHS 74
>07_03_0294 + 16342606-16343100,16343359-16344120
Length = 418
Score = 28.7 bits (61), Expect = 1.7
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 246 LH-VAAIAPFRLPAPSARTGDRGPQRLRYVLDELVHCGRGS 365
LH ++ + P+ LP P+ R DR QRL ++ E++ R S
Sbjct: 215 LHLISGLLPY-LPIPAHRRRDRARQRLGEIITEVIRLRRNS 254
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 28.7 bits (61), Expect = 1.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 290 GPDRRPWSSTFTICIGRIGTLRARVWVCS 376
GPD PW F++ + + G LR+R+ V S
Sbjct: 42 GPDDTPWDGGFSLPVCQHGNLRSRLTVNS 70
>11_05_0013 + 18383235-18383702,18385570-18386571
Length = 489
Score = 28.3 bits (60), Expect = 2.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 252 VAAIAPFRLPAPSARTGDRGPQRLRYVLDELVHCGRGSG 368
V+ I P+ LP P+ R DR QRL+ + ++ + SG
Sbjct: 213 VSVIFPY-LPIPAHRRRDRARQRLKEIFATIIKSRKASG 250
>10_08_0509 +
18419815-18422150,18422249-18422291,18423154-18423487,
18423766-18423878,18424461-18424589,18424771-18424864,
18424967-18425050,18425859-18426047,18426897-18427017,
18427476-18427692
Length = 1219
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 294 RTGDRGPQRLRYVLDELVHCGRGS 365
RTG G + R+V DEL+ GRG+
Sbjct: 29 RTGGSGAEDARHVFDELLRRGRGA 52
>11_04_0391 +
17127309-17127449,17127886-17127950,17129209-17129305,
17129729-17130193,17130505-17130528
Length = 263
Score = 27.9 bits (59), Expect = 2.9
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +1
Query: 154 CDAAG*CIRNLLTHQRSQITVSCGICAMFPSC-MSLLSRRSDSQH 285
C A C+ N H R++ T SC + C + L S +S QH
Sbjct: 78 CGAHLDCLENFEDHYRTRHTASCSYECLVEGCGVKLKSYKSRQQH 122
>05_02_0120 - 6797954-6798970,6799466-6799951
Length = 500
Score = 27.9 bits (59), Expect = 2.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 273 RLPAPSARTGDRGPQRLRYVLDELVHCGRGS 365
RLP P+ R DR RL + ++V RGS
Sbjct: 225 RLPIPAHRRRDRARARLGEIFSDIVRSRRGS 255
>02_01_0147 - 1048117-1048329,1048522-1049682,1049783-1050070
Length = 553
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 252 VAAIAPFRLPAPSARTGDRGPQRLRYVLDELVHCGRGSG 368
VA A PAPS G RG +R+ + L G G
Sbjct: 3 VAVAASLSTPAPSPAAGGRGRRRVNVAVASLRRAAAGGG 41
>11_01_0196 - 1547373-1549859
Length = 828
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 112 LLFIHVLCSQWRLHCD 159
L ++H CS+W +HCD
Sbjct: 653 LAYLHSECSEWIVHCD 668
>06_03_0543 + 21967787-21970261
Length = 824
Score = 27.5 bits (58), Expect = 3.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 112 LLFIHVLCSQWRLHCD 159
L ++H CS+W +HCD
Sbjct: 624 LAYLHHECSEWVIHCD 639
>01_06_0270 +
28048449-28048577,28048915-28048978,28049537-28049638,
28049971-28050021,28050075-28050172,28050395-28050485,
28050718-28050782,28050913-28051107,28051207-28051326,
28051592-28051662,28051787-28052012,28052330-28052407,
28052507-28052735,28052958-28053097,28053571-28053699
Length = 595
Score = 27.5 bits (58), Expect = 3.8
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -3
Query: 255 RHARREHGANTARYGYLASLM 193
RH RE+ ANT Y YLA M
Sbjct: 234 RHIEREYFANTTEYKYLAHRM 254
>01_06_1760 -
39697079-39697162,39697280-39697340,39697415-39697479,
39697579-39697860,39697938-39698012,39698121-39698195,
39698343-39698399,39698653-39698726,39698912-39699055,
39699608-39699662,39700027-39700149,39700276-39700320,
39701068-39701160,39701249-39701662
Length = 548
Score = 27.1 bits (57), Expect = 5.1
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 184 LLTHQRSQITVSCGICAMFPSCMSLLSRRSDSQHPRPGQA 303
LLT +S G+ A+ P SLL R + + PG+A
Sbjct: 8 LLTAATGSAALSVGVAAVGPRAPSLLLRSASATRRAPGRA 47
>12_02_1109 + 26151421-26153601
Length = 726
Score = 26.6 bits (56), Expect = 6.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 43 VEDNCS*IISKLKKYFFLNNNYILLFIHVLC 135
++++C ++ L+K FF I L IH LC
Sbjct: 459 LKESCDVVVQMLQKGFFPTTVEINLLIHALC 489
>11_08_0024 + 27747449-27747940,27748141-27750177
Length = 842
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 165 RLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIA 266
RL ++ TS K N+RI++YL ++ V A+A
Sbjct: 657 RLGFSPCQTTSPKKNHRIIKYLVPPIIITVGAVA 690
>07_03_1692 -
28733184-28733980,28734306-28734373,28734481-28734594,
28734835-28734884,28735012-28735422,28735534-28735610,
28736083-28736257,28736843-28736939,28737070-28737833,
28737900-28738001,28738093-28738174,28739004-28739161
Length = 964
Score = 26.6 bits (56), Expect = 6.7
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 233 PCSRLACRCYRAVQTPSTLGPDRRPWSSTFTICI 334
P R C C +Q PS GP P + T +C+
Sbjct: 749 PRHRPGCTCIVCIQPPSGKGPKHNP-ACTCNVCM 781
>06_03_0691 +
23552437-23552914,23555168-23555953,23556045-23556135,
23556214-23556406
Length = 515
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2
Query: 313 GPRSPVRAEGAGSLNGAIAATCKTGTWRKYRTIRLFGFFDV 191
G P R GA ++ + A +T R+ R +F FFDV
Sbjct: 34 GGCEPARKAGAVTMEHVLLALHETEAEREARIREMFAFFDV 74
>05_05_0018 -
21547649-21547875,21547973-21548187,21548831-21549096,
21549534-21549657,21549946-21550041,21550179-21550294,
21550374-21550455,21550574-21550728,21550819-21551001,
21551114-21551305,21551389-21551564,21551676-21551729,
21552076-21552147,21552255-21552582
Length = 761
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +3
Query: 105 LHIIVHSCIMLTMEATL*RGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHV 254
LHI+VH I+++++ + GR + ++ N+ +R +P HV
Sbjct: 520 LHILVHKVILISLDKGVKEGRSLVHDWLSLLIARYNQALRSDARIPESHV 569
>04_03_0789 + 19660713-19660896,19661405-19662027
Length = 268
Score = 26.6 bits (56), Expect = 6.7
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = -2
Query: 355 PQCTNSSNTYRKR*GPRSPVRAEGAGSLNGAIAATCKT---GTW 233
PQ + S R GP SP+ + G+GS A ++T G W
Sbjct: 211 PQILDFSTQQLIRAGPPSPMPSSGSGSATAAASSTTSASSPGAW 254
>02_05_1327 - 35718908-35719270,35719537-35719953,35720183-35720557
Length = 384
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/56 (32%), Positives = 22/56 (39%), Gaps = 6/56 (10%)
Frame = +2
Query: 218 RAVFAP----CSRLACRCYRAVQTPSTLGPD--RRPWSSTFTICIGRIGTLRARVW 367
R VF P C RL C C A P+ P R W TF+ + +G W
Sbjct: 136 RGVFVPELGLCPRLRCLC--AFDLPTATAPPVVRYVWPETFSEELNAMGVRAGNPW 189
>10_08_0511 +
18435745-18436499,18436624-18436742,18436788-18437372,
18438534-18438667,18439128-18439148,18439656-18439739,
18439832-18440077,18440763-18440925,18441024-18441066,
18441392-18441773,18442212-18442267,18442351-18442417,
18442542-18442721
Length = 944
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 294 RTGDRGPQRLRYVLDELVHCGRGS 365
R G G + R+V DEL+ GRG+
Sbjct: 25 RAGGSGAEDARHVFDELLRRGRGA 48
>10_08_0495 -
18318028-18320399,18322450-18322981,18323097-18323200,
18323653-18323701,18323979-18324119,18324889-18324957,
18325048-18325137,18325301-18326251,18326831-18327502
Length = 1659
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 294 RTGDRGPQRLRYVLDELVHCGRGS 365
R G G + R+V DEL+ GRG+
Sbjct: 907 RAGGSGAEDARHVFDELLRRGRGA 930
>04_03_0132 -
11647230-11647432,11647520-11647982,11648159-11648271,
11648956-11649412
Length = 411
Score = 26.2 bits (55), Expect = 8.9
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -2
Query: 367 PDPRPQCTNSSNTYRKR*GPRSPVRAEGAGSLNGAIAATCKTGTWRKY 224
P P P C+ + + KR GP+ +GA NG T + R Y
Sbjct: 119 PLPPPTCSGHMDDWYKRFGPQDDDGGDGA---NGGSDGNMSTSSERSY 163
>03_06_0388 +
33564096-33564485,33564642-33564812,33565125-33565145,
33565260-33565467,33566156-33566346,33566465-33566584,
33566703-33566936
Length = 444
Score = 26.2 bits (55), Expect = 8.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 271 NGAIAATCKTGTWRKYRTI 215
NGA +TC+ WRK T+
Sbjct: 417 NGATGSTCQNAKWRKSGTV 435
>01_06_0481 -
29646245-29646371,29646474-29646556,29646672-29646752,
29646843-29646899,29647007-29647094,29647304-29647374,
29647457-29647585,29647662-29648051,29648332-29648517,
29648612-29648692,29648787-29648879,29648966-29649086,
29649200-29649409,29649560-29649727,29649898-29650065,
29650144-29650311,29650453-29650620,29650738-29650905,
29651023-29651190,29651567-29651734,29652391-29652558,
29652645-29652812,29655720-29655887,29656069-29656236,
29656391-29656558,29656670-29656837,29657525-29657664,
29658033-29658221,29658243-29658315,29658379-29658452,
29658535-29658654,29658718-29658738,29658794-29658999,
29659094-29659271,29660066-29660126,29660232-29660341,
29660427-29660558,29661091-29661258,29661339-29661465,
29661794-29661831,29663321-29663422,29663505-29663562,
29663659-29663760,29663844-29663990,29664098-29664234,
29664313-29664462,29664561-29664720,29665820-29665878,
29666025-29666181,29666288-29666433,29666523-29666666,
29667242-29667376
Length = 2344
Score = 26.2 bits (55), Expect = 8.9
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 67 ISKLKKYFFLNNN----YILLFIHVLCSQWRLHCDAAG*CIRNLLTHQRSQITVSC 222
++ LK++ F N +I + I +L +QWR H D + N L +R+ +T C
Sbjct: 820 MAALKEFMFRKQNKATTHIQMDIKLLVTQWRCHRDNS-----NYLKLKRAALTYQC 870
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,321,811
Number of Sequences: 37544
Number of extensions: 244610
Number of successful extensions: 738
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 738
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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