Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-3473
         (383 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   1.3  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    22   6.7  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    22   6.7  
U50474-1|AAA93476.1|   62|Anopheles gambiae protein ( Anopheles ...    22   8.9  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    22   8.9  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    22   8.9  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 373  THPDPRPQCTNSSNTY 326
            T   P+  C NSSNTY
Sbjct: 1695 TEMKPKQNCVNSSNTY 1710


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +1

Query: 13  VYNLCCKSRHVEDNCS*IISKLKKYFFLN 99
           +Y  CC   +++   + II +   Y+F N
Sbjct: 224 IYYNCCPEPYIDITFAIIIRRRTLYYFFN 252


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 14  CIIYAVNQGTLRIIVHKLS 70
           C+I  V +G  R+I+H+L+
Sbjct: 483 CLIDGVAKGLERVILHRLN 501


>U50474-1|AAA93476.1|   62|Anopheles gambiae protein ( Anopheles
           gambiae putativetrypsin-like enzyme precursor, mRNA,
           partial cds. ).
          Length = 62

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 240 PVLHVAAIAPFRLPAP 287
           P+   A I P RLP P
Sbjct: 18  PITFTARIQPIRLPGP 33


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +1

Query: 106 YILLFIHVLCSQWRLHCDAAG 168
           +I+  ++  CS W ++C A G
Sbjct: 238 HIIAMLNGFCSLWFVNCTAFG 258


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +2

Query: 248 ACRCYRAVQTPSTLGPDRRPWSSTFTICIGRIGTLRARVWVCST 379
           A  C R+ Q    L PD R  +S+     GR+  +++ V V +T
Sbjct: 242 AAGCPRSGQGNFQLSPDFRQRASSNASSCGRLSPIQSIVGVENT 285


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,755
Number of Sequences: 2352
Number of extensions: 9809
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)