Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2476
         (679 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   4.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   4.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.2  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +3

Query: 348 LLARCGKTCLGICSFGTDSTSSVLDIDEKR*GKGHT*LQIGRMRMFAIKL 497
           L AR     +G C+FG D +S   +  E R   G     +  M +  +KL
Sbjct: 177 LTARFTTDVIGSCAFGIDMSSMTNENSEFR-RMGREVFAVNFMNVMRMKL 225


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = +1

Query: 370 RVLVYAHLGRTVQVQCLTLTKKDKEKVILNYRLVG*GCLRLNC 498
           RV +YA++  T+++  L LTK  +++ +  +  +G      NC
Sbjct: 645 RVDMYANMIETMELTSLLLTKVAEDRPLPEF-YIGGNPFNCNC 686


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 49  NYIDICYINIIHS 11
           N IDIC+I +++S
Sbjct: 87  NIIDICWITMVYS 99


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,111
Number of Sequences: 438
Number of extensions: 3492
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)