Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2473
         (381 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   0.69 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   0.92 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     20   8.5  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 0.69
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 230 CNICKDYSIVGFRYRCLKC 286
           C+ C++Y  V   Y C+ C
Sbjct: 470 CDQCEEYEYVHDEYTCMDC 488


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 230 CNICKDYSIVGFRYRCLKC 286
           C+ C++Y  V   Y C+ C
Sbjct: 560 CDQCEEYEYVYDEYTCMDC 578


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 184 HGQPHHGLRLALQP 143
           H Q HHGL +   P
Sbjct: 806 HQQSHHGLHINSSP 819


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 224 AKCNICKDYSI 256
           AKC I KDYS+
Sbjct: 475 AKCIIGKDYSL 485


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,376
Number of Sequences: 438
Number of extensions: 1847
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)