Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2425
(462 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0871 - 20441689-20441756,20442220-20442349,20442422-204425... 101 2e-22
02_04_0100 - 19730137-19730237,19731215-19731344,19731419-197315... 101 2e-22
02_01_0469 - 3359156-3359500,3359595-3359680,3359766-3359811,335... 101 2e-22
02_01_0045 + 307058-307552,308670-308716,308779-308866,309664-30... 35 0.037
04_01_0374 + 4914864-4914947,4915094-4915217,4921146-4921471,492... 28 3.2
12_02_0938 - 24576419-24576719,24576817-24576969,24577052-245778... 28 4.2
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 28 4.2
12_02_0057 + 13006980-13006985,13007066-13007542 27 5.6
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 27 5.6
02_03_0016 + 13962086-13962326,13962529-13962614,13962652-139627... 27 5.6
09_06_0311 + 22218219-22218421,22219157-22219422,22219881-222200... 27 7.3
08_02_0650 - 19708479-19710507,19711033-19711889 27 7.3
05_03_0657 + 16694833-16694963,16695567-16695684,16696280-166963... 27 7.3
12_01_0608 - 5013076-5013489,5014698-5015228,5015632-5016005,501... 27 9.7
11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,348... 27 9.7
10_08_0113 - 14896341-14897153 27 9.7
>04_03_0871 -
20441689-20441756,20442220-20442349,20442422-20442507,
20444271-20444316,20444425-20444547,20445302-20445370
Length = 173
Score = 101 bits (243), Expect = 2e-22
Identities = 49/85 (57%), Positives = 61/85 (71%)
Frame = -2
Query: 458 GEPVFGEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPE 279
GE VFG AHIFASFNDT +HVT+L RET+ +TGGMKVK R+++SPYA ML +Q+V +
Sbjct: 46 GEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQ 105
Query: 278 KCKTLGITALAHKAPCYW*KQNKDP 204
+CK LGITAL K + K P
Sbjct: 106 RCKELGITALHIKLRATGGNKTKTP 130
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -3
Query: 280 KNAKLLA*RPLHIKLRATGENKTKTPGP 197
+ K L LHIKLRATG NKTKTPGP
Sbjct: 105 QRCKELGITALHIKLRATGGNKTKTPGP 132
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -1
Query: 198 PGAQXXXXXXXXXSMKIXRIEDVTPVPSDST 106
PGAQ MKI RIEDVTPVP+DST
Sbjct: 132 PGAQSALRALARSGMKIGRIEDVTPVPTDST 162
>02_04_0100 -
19730137-19730237,19731215-19731344,19731419-19731504,
19732410-19732455,19732558-19732680,19732779-19732781
Length = 162
Score = 101 bits (243), Expect = 2e-22
Identities = 49/85 (57%), Positives = 61/85 (71%)
Frame = -2
Query: 458 GEPVFGEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPE 279
GE VFG AHIFASFNDT +HVT+L RET+ +TGGMKVK R+++SPYA ML +Q+V +
Sbjct: 24 GEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQ 83
Query: 278 KCKTLGITALAHKAPCYW*KQNKDP 204
+CK LGITAL K + K P
Sbjct: 84 RCKELGITALHIKLRATGGNKTKTP 108
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -3
Query: 280 KNAKLLA*RPLHIKLRATGENKTKTPGP 197
+ K L LHIKLRATG NKTKTPGP
Sbjct: 83 QRCKELGITALHIKLRATGGNKTKTPGP 110
Score = 27.1 bits (57), Expect = 7.3
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 11/42 (26%)
Frame = -1
Query: 198 PGAQXXXXXXXXXSMKIXRI-----------EDVTPVPSDST 106
PGAQ MKI RI EDVTPVP+DST
Sbjct: 110 PGAQSALRALARSGMKIGRIADDVLSIFCHTEDVTPVPTDST 151
>02_01_0469 -
3359156-3359500,3359595-3359680,3359766-3359811,
3359897-3360016,3360622-3360624
Length = 199
Score = 101 bits (243), Expect = 2e-22
Identities = 49/85 (57%), Positives = 61/85 (71%)
Frame = -2
Query: 458 GEPVFGEAHIFASFNDTLVHVTNLPARETIAGVTGGMKVKPARNKASPYAVMLPAQNVPE 279
GE VFG AHIFASFNDT +HVT+L RET+ +TGGMKVK R+++SPYA ML +Q+V +
Sbjct: 23 GEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQ 82
Query: 278 KCKTLGITALAHKAPCYW*KQNKDP 204
+CK LGITAL K + K P
Sbjct: 83 RCKELGITALHIKLRATGGNKTKTP 107
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -3
Query: 280 KNAKLLA*RPLHIKLRATGENKTKTPGP 197
+ K L LHIKLRATG NKTKTPGP
Sbjct: 82 QRCKELGITALHIKLRATGGNKTKTPGP 109
>02_01_0045 +
307058-307552,308670-308716,308779-308866,309664-309756,
309788-309950,310554-310627,310889-310927
Length = 332
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2
Query: 362 VTGGMKVKPARNKASPYAVMLPAQNVPEKCK 270
V GGMK+K +++SPYA ML +Q+V CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = -3
Query: 307 LCCRHRMYQKNAKLLA*RPLH---IKLRATGENKTKTPGP 197
LCC+ Y+ N ++L L I L A G NKT TPGP
Sbjct: 238 LCCK---YRTNGQILGDCFLEFCLIMLCAAGGNKTNTPGP 274
>04_01_0374 +
4914864-4914947,4915094-4915217,4921146-4921471,
4921527-4921658,4921824-4922362,4922445-4922597,
4922695-4922995
Length = 552
Score = 28.3 bits (60), Expect = 3.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 460 WANQCLVKHTFSLHSMTHWFMLLIYP 383
+ N+CL H + M HW +L+I P
Sbjct: 438 YVNRCLWSHQDKEYIMRHWILLVIVP 463
>12_02_0938 -
24576419-24576719,24576817-24576969,24577052-24577884,
24577966-24578427,24578506-24579213
Length = 818
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 460 WANQCLVKHTFSLHSMTHWFMLLIYP 383
+ N+CL H + M HW +L+I P
Sbjct: 704 YVNRCLWAHQDKEYIMRHWILLVIVP 729
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 256 RPLHIKLRATGENKTKTPGPWCSVCTSGSC 167
+PL LRAT + ++PGP C +C
Sbjct: 91 KPLPAALRATARSANRSPGPPAGQCGGRNC 120
>12_02_0057 + 13006980-13006985,13007066-13007542
Length = 160
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -2
Query: 362 VTGGMKVKPARNKASPYAVMLPAQNVPEKCKTLGITA 252
V GG K +PAR +S A N P K + TA
Sbjct: 73 VGGGNKRRPARTSSSDSGAATAASNTPAKLQQAAATA 109
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 280 SGTFCAGNITA*GDALLRAGFTFMPP 357
SG +C G+ A ALL FMPP
Sbjct: 427 SGAYCGGDCAAATKALLPQSVVFMPP 452
>02_03_0016 +
13962086-13962326,13962529-13962614,13962652-13962750,
13963022-13963131,13964024-13964083,13964220-13964304
Length = 226
Score = 27.5 bits (58), Expect = 5.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 151 DXPH*RCHPRTIRLDP 104
D PH RC+ R +RLDP
Sbjct: 10 DLPHVRCYTRHLRLDP 25
>09_06_0311 + 22218219-22218421,22219157-22219422,22219881-22220050,
22220149-22220365,22220798-22221021,22221559-22221738,
22221875-22222013,22222107-22222255,22223394-22223505,
22223998-22224506,22224661-22224784,22224904-22225178,
22225507-22225626,22225707-22225769,22225861-22226052,
22226381-22226440,22226535-22226738,22226926-22227051,
22227093-22227254,22227357-22227476,22227665-22227820,
22227895-22227957,22228041-22228168,22228524-22228920,
22229442-22229544,22229646-22229776,22230096-22230167,
22230472-22230553,22231083-22231190,22231288-22231429,
22231659-22231698,22231746-22231876,22232215-22232301,
22232395-22232605,22232687-22232741,22232836-22232927,
22233011-22233071,22233361-22233719
Length = 2010
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 71 YSLRPLRPPFLRVESDGTGVTSSMRXI 151
Y LRP PFLR +S G SS+ I
Sbjct: 1712 YFLRPKMKPFLRSDSTGHSADSSINHI 1738
>08_02_0650 - 19708479-19710507,19711033-19711889
Length = 961
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 154 EDXPH*RCHPRTIRLDP*EGWPKRTQAVIC 65
ED +C P +RLD G+PK T V C
Sbjct: 805 EDLQVLKCLPALLRLDLYPGYPKHTLKVSC 834
>05_03_0657 +
16694833-16694963,16695567-16695684,16696280-16696376,
16700126-16700232,16700473-16700595,16700791-16700944,
16701237-16701297,16701417-16701781,16701875-16703483,
16703697-16703940
Length = 1002
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 427 SLHSMTHWFMLLIYPPGKLSPVSLV 353
S SMT W L +Y G PVS V
Sbjct: 618 SYSSMTPWMKLALYTSGSCGPVSAV 642
>12_01_0608 -
5013076-5013489,5014698-5015228,5015632-5016005,
5016389-5016637,5016942-5017047
Length = 557
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 33 Y*KSTLNLT*KQITACVLFGHPSYGSSLMVRG 128
Y KS+++ +I++ + H +YGS+L+VRG
Sbjct: 67 YLKSSVSYPVSEISSPIRAQHVAYGSNLIVRG 98
>11_01_0450 - 3487464-3487844,3487883-3488268,3488883-3489033,
3489132-3491102,3492090-3492149,3492240-3492436,
3492678-3492963
Length = 1143
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 460 WANQCLVKHTFSLHSMTHWFMLLIYPPGKLSPVSL 356
W N+C+ K ++ +H + ML + P +P +L
Sbjct: 915 WINECMEKESWWIHVQSSTEMLPVAPTPPATPTAL 949
>10_08_0113 - 14896341-14897153
Length = 270
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 235 RATGENKTKTPGPWCSVCTSGSCSFKYEDXPH*RCHPR 122
+ G + + P P+ VCT SCS P + H R
Sbjct: 47 QVAGNSTDRAPTPFTVVCTKDSCSAALCPTPKIKSHHR 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,227,543
Number of Sequences: 37544
Number of extensions: 283226
Number of successful extensions: 610
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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