Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2371
         (710 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    23   2.2  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    23   2.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    23   2.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    23   2.2  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   6.6  
AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly pro...    22   6.6  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   8.7  
AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly pro...    21   8.7  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   8.7  

>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 429 LRSQRETLVGSIISRADSNLT 367
           +R Q ET++ ++ S ADS++T
Sbjct: 116 VRPQNETILTTVSSEADSDVT 136


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 429 LRSQRETLVGSIISRADSNLT 367
           +R Q ET++ ++ S ADS++T
Sbjct: 164 VRPQNETILTTVSSEADSDVT 184


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 429 LRSQRETLVGSIISRADSNLT 367
           +R Q ET++ ++ S ADS++T
Sbjct: 164 VRPQNETILTTVSSEADSDVT 184


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = -3

Query: 429 LRSQRETLVGSIISRADSNLT 367
           +R Q ET++ ++ S ADS++T
Sbjct: 164 VRPQNETILTTVSSEADSDVT 184


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 682 LLLLVCLGDSC 650
           LLL+VCLG +C
Sbjct: 5   LLLMVCLGIAC 15


>AY078401-1|AAL83704.1|   27|Apis mellifera major royal jelly
           protein MRJP4 protein.
          Length = 27

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 682 LLLLVCLGDSC 650
           LLL+VCLG +C
Sbjct: 5   LLLMVCLGIAC 15


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 682 LLLLVCLGDSC 650
           LLL+VCLG +C
Sbjct: 5   LLLVVCLGIAC 15


>AY078400-1|AAL83703.1|   31|Apis mellifera major royal jelly
           protein MRJP3 protein.
          Length = 31

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 682 LLLLVCLGDSC 650
           LLL+VCLG +C
Sbjct: 5   LLLVVCLGIAC 15


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -2

Query: 682 LLLLVCLGDSC 650
           LLL+VCLG +C
Sbjct: 5   LLLVVCLGIAC 15


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,816
Number of Sequences: 438
Number of extensions: 3899
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)