Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2365
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   2.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   5.0  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   6.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   6.6  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   8.7  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 121  FHSGGDGVRHDPV 159
            F SGGDGV+  P+
Sbjct: 1159 FTSGGDGVKSAPI 1171


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 285 ITIFSLHVSSLVTVFT 332
           +TI ++ VS LVT+FT
Sbjct: 465 VTIQNVDVSQLVTLFT 480


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 264 TRLKKKYITIFSLHVSSLVTV 326
           T+ KK+ I +FS H S++ +V
Sbjct: 244 TQKKKRKIYLFSGHESNIASV 264


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 264 TRLKKKYITIFSLHVSSLVTV 326
           T+ KK+ I +FS H S++ +V
Sbjct: 259 TQKKKRKIYLFSGHESNIASV 279


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 285 ITIFSLHVSSLVTVF 329
           I +FSLH + L+T++
Sbjct: 152 IHVFSLHDNKLITMY 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,047
Number of Sequences: 438
Number of extensions: 2162
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)