Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2364
         (444 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    82   3e-18
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   3.5  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.0  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 81.8 bits (193), Expect = 3e-18
 Identities = 54/137 (39%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
 Frame = +3

Query: 15  PVCLP--NTPDSLYTGAEAILAGWGATGETGNWSCMLLKAELPILSNEECQGTSYNSSKI 188
           P CLP  +  DS + G++  + GWG T   G  S +L K  L +L+  EC    Y  + +
Sbjct: 275 PACLPFQHFLDS-FAGSDVTVLGWGHTSFNGMLSHILQKTTLNMLTQVECY--KYYGNIM 331

Query: 189 KNTMMCAGYPATAHKDACTGDSGGPLXXENERNVYEL-IGIVSWGYGCARKGYPGVYTRV 365
            N M CA       KDAC  DSGGP+  +N R    + IGI+SWG  C +  YP   T+V
Sbjct: 332 VNAM-CA---YAKGKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAECGK--YPNGNTKV 385

Query: 366 TKYLDWIRDNTDGACYC 416
             Y+DWI   T  A YC
Sbjct: 386 GSYIDWIVSQTPDAEYC 402


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -2

Query: 371 FGNPRIHSRVTLSSTPVAPRND 306
           FG PRI S     S    P ND
Sbjct: 338 FGTPRIMSSFDFQSKDQGPPND 359


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 347 RVTLSSTPVAPRNDSY*FIDVSFVF 273
           ++  +  P AP+N +  F+D S VF
Sbjct: 311 KMPCTQPPSAPQNLTVNFVDQSTVF 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,885
Number of Sequences: 438
Number of extensions: 2925
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)