Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2255
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    26   0.35 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    26   0.35 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    26   0.35 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    24   1.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   1.9  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   2.5  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    23   4.3  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    23   4.3  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 473 STCSSSELKFNCSISFYDCIKS 538
           +T S + L  +C   FYDC+K+
Sbjct: 80  NTASHTRLSCDCDDKFYDCLKN 101


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 473 STCSSSELKFNCSISFYDCIKS 538
           +T S + L  +C   FYDC+K+
Sbjct: 85  NTASHTRLSCDCDDKFYDCLKN 106


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 473 STCSSSELKFNCSISFYDCIKS 538
           +T S + L  +C   FYDC+K+
Sbjct: 85  NTASHTRLSCDCDDKFYDCLKN 106


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 232 CISLRTFQSCYTRTKYYLFKMYV 300
           C+ +   +S +T T YYLF + V
Sbjct: 75  CVVIARNKSMHTATNYYLFSLAV 97


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 192 TKNHMDLIIVAPFMYQLTNFSVLLHT 269
           T+   + I+ A F+ QL   SVL+HT
Sbjct: 413 TEKDNNEIVTAQFLNQLKKSSVLVHT 438



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 232 CISLRTFQSCYTRTKYYLFKMYV 300
           CI +    S  T T YYLF + V
Sbjct: 55  CIVIWRNPSMQTPTNYYLFNLAV 77


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = -2

Query: 118 QIVPL*CNRCNYTETLELISQDEWRIFVVDVYVS 17
           ++VPL C+  N  + L++I   E  +  +D+ ++
Sbjct: 57  KLVPLQCDLSNQNDILKVIEWVEKNLGAIDILIN 90


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -1

Query: 512 YYS*TLIHYSSMCFSHKKKTI--VLFPCKTLE 423
           Y+  T I Y S+C  H+K+ +  +L    TLE
Sbjct: 39  YFHHTYIIYESLCGRHEKRLLNELLSSYNTLE 70


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -1

Query: 512 YYS*TLIHYSSMCFSHKKKTI--VLFPCKTLE 423
           Y+  T I Y S+C  H+K+ +  +L    TLE
Sbjct: 39  YFHHTYIIYESLCGRHEKRLLNELLSSYNTLE 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,015
Number of Sequences: 438
Number of extensions: 4465
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)