Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1086
         (506 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4785 Cluster: PREDICTED: similar to ENSANGP000...    33   2.8  
UniRef50_UPI0000DB6CE7 Cluster: PREDICTED: similar to Guanine nu...    33   4.9  

>UniRef50_UPI00015B4785 Cluster: PREDICTED: similar to
            ENSANGP00000009998; n=1; Nasonia vitripennis|Rep:
            PREDICTED: similar to ENSANGP00000009998 - Nasonia
            vitripennis
          Length = 1804

 Score = 33.5 bits (73), Expect = 2.8
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -3

Query: 423  QIYRFYKLTFSSKRNI*RLSSQNLFILLCIQRVTKYPVKI*LIIKAKNSDNP 268
            ++ R +      +  + R  + N F+++ +QRVTKYP+ +  ++KA  S  P
Sbjct: 1526 ELLRIFLKVSQMENTVLRRMNLNSFLMVPVQRVTKYPLLLARLLKATPSGRP 1577


>UniRef50_UPI0000DB6CE7 Cluster: PREDICTED: similar to Guanine
            nucleotide exchange factor GEF64C CG32239-PA; n=1; Apis
            mellifera|Rep: PREDICTED: similar to Guanine nucleotide
            exchange factor GEF64C CG32239-PA - Apis mellifera
          Length = 1726

 Score = 32.7 bits (71), Expect = 4.9
 Identities = 15/52 (28%), Positives = 29/52 (55%)
 Frame = -3

Query: 423  QIYRFYKLTFSSKRNI*RLSSQNLFILLCIQRVTKYPVKI*LIIKAKNSDNP 268
            ++ R +      +  + R  + N F+++ +QRVTKYP+ +  ++KA  S  P
Sbjct: 1448 ELLRIFLKVSQMENTVLRRMNLNSFLMVPVQRVTKYPLLLARLLKATPSVRP 1499


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,699,369
Number of Sequences: 1657284
Number of extensions: 6847843
Number of successful extensions: 13228
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13227
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30528237263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)