Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0811
         (720 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    40   0.047
UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    40   0.082
UniRef50_A5FFH8 Cluster: Putative uncharacterized protein; n=1; ...    33   9.4  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 40.3 bits (90), Expect = 0.047
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 482 AGWWYLPVRTHKRSYHQ 432
           A WWYLP RTHKRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585



 Score = 40.3 bits (90), Expect = 0.047
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 173 AGWWYLPVRTHKRSYHQ 123
           A WWYLP RTHKRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 39.5 bits (88), Expect = 0.082
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = -2

Query: 350 R*VDELTAHLVLSGYWSP 297
           R VDELTAHLVLSGYWSP
Sbjct: 158 RWVDELTAHLVLSGYWSP 175



 Score = 36.7 bits (81), Expect = 0.58
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -2

Query: 656 WVDEITAHLVLSGY*SP 606
           WVDE+TAHLVLSGY SP
Sbjct: 159 WVDELTAHLVLSGYWSP 175


>UniRef50_A5FFH8 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium johnsoniae UW101|Rep: Putative
           uncharacterized protein - Flavobacterium johnsoniae
           UW101
          Length = 484

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = -1

Query: 297 IDIYNVNAPPTLRYKF*GLNYSYNGCPTLQTETHYCFTAEIGRVVVLTRADSQEVLPPVI 118
           + I+ +   P L Y F G  +S       + + +   T  +GRVV LT   + EVLP VI
Sbjct: 220 VAIHGIRKGPNLNYPFFGHEFSR------EDKDNLLKTGNMGRVVNLTNPKTDEVLPSVI 273

Query: 117 TI 112
           ++
Sbjct: 274 SV 275


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 757,363,058
Number of Sequences: 1657284
Number of extensions: 14538627
Number of successful extensions: 25250
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25248
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58264468239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)