Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0803
(741 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g33120.1 68415.m04060 synaptobrevin-related protein / vesicl... 62 5e-10
At2g32670.1 68415.m03994 synaptobrevin family protein similar to... 62 5e-10
At1g04760.1 68414.m00472 synaptobrevin family protein similar to... 62 5e-10
At3g54300.1 68416.m06001 synaptobrevin family protein similar to... 60 1e-09
At1g04750.1 68414.m00470 synaptobrevin family protein similar to... 58 6e-09
At4g32150.1 68417.m04573 synaptobrevin family protein similar to... 49 4e-06
At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated memb... 48 5e-06
At5g22360.1 68418.m02609 synaptobrevin family protein similar to... 48 9e-06
At3g24890.1 68416.m03121 synaptobrevin-related similar to SYNAPT... 40 0.002
At2g33110.1 68415.m04059 synaptobrevin family protein similar to... 39 0.004
At5g58320.2 68418.m07301 kinase interacting protein-related low ... 31 0.80
At5g58320.1 68418.m07300 kinase interacting protein-related low ... 31 0.80
At1g46912.1 68414.m05219 F-box family protein-related contains w... 30 1.9
At5g41990.1 68418.m05112 protein kinase family protein contains ... 29 4.3
At3g10680.1 68416.m01284 heat shock protein-related contains wea... 29 4.3
At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-conta... 29 4.3
At1g62110.1 68414.m07008 mitochondrial transcription termination... 28 7.5
At1g58190.1 68414.m06605 leucine-rich repeat family protein cont... 28 7.5
At1g33750.1 68414.m04172 terpene synthase/cyclase family protein... 28 7.5
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 27 9.9
>At2g33120.1 68415.m04060 synaptobrevin-related protein /
vesicle-associated membrane protein 722 (VAMP722) (SAR1)
identical to r to Vesicle-associated membrane protein
722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; identical to cDNA
synaptobrevin-related protein (SAR1) GI:600709
Length = 221
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/67 (40%), Positives = 46/67 (68%)
Frame = +2
Query: 125 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 304
+LA+ +A+V EV G+M N+EKVL+R +K+ L ++ + L+ A F Q +++RK W+
Sbjct: 130 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWF 189
Query: 305 QNLKMML 325
QN+K+ L
Sbjct: 190 QNMKIKL 196
>At2g32670.1 68415.m03994 synaptobrevin family protein similar to
vesicle-associated membrane protein 7 [Rattus
norvegicus] GI:9502258, SP|P51809 Synaptobrevin-like
protein 1 {Homo sapiens}; contains Pfam profile PF00957:
Synaptobrevin
Length = 285
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/67 (40%), Positives = 46/67 (68%)
Frame = +2
Query: 125 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 304
+LA+ +A+V EV G+M N+EKVL+R +K+ L ++ + L+ A F Q K++RK W+
Sbjct: 195 KLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWF 254
Query: 305 QNLKMML 325
+N+K+ L
Sbjct: 255 ENMKIKL 261
>At1g04760.1 68414.m00472 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 220
Score = 61.7 bits (143), Expect = 5e-10
Identities = 27/67 (40%), Positives = 46/67 (68%)
Frame = +2
Query: 125 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 304
+L++ +A+V EV G+M N+EKVL+R +K+ L ++ + L+ A F Q K+KRK W+
Sbjct: 130 KLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWF 189
Query: 305 QNLKMML 325
+N+K+ L
Sbjct: 190 ENMKIKL 196
>At3g54300.1 68416.m06001 synaptobrevin family protein similar to
vesicle-associated membrane protein 7B (At VAMP7B),
Arabidopsis thaliana, EMBL:AF025333
Length = 240
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/67 (41%), Positives = 47/67 (70%)
Frame = +2
Query: 125 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 304
+L++ +A++ EV GIM N+EKVL+R +K+ L ++ + LQ A F++Q +L+RK W
Sbjct: 149 KLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWL 208
Query: 305 QNLKMML 325
Q+L+M L
Sbjct: 209 QSLQMKL 215
>At1g04750.1 68414.m00470 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana};
Length = 219
Score = 58.0 bits (134), Expect = 6e-09
Identities = 26/67 (38%), Positives = 44/67 (65%)
Frame = +2
Query: 125 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 304
+LA+ +A+V EV G+M N+EKVL+R +K+ L ++ + L+ A F +++RK W
Sbjct: 130 KLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWL 189
Query: 305 QNLKMML 325
QN+K+ L
Sbjct: 190 QNMKIKL 196
>At4g32150.1 68417.m04573 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 219
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/65 (29%), Positives = 41/65 (63%)
Frame = +2
Query: 125 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 304
R+ + + ++++V G+M N++KVL+R ++L L ++ +Q +F +QA + + WW
Sbjct: 126 RINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWW 185
Query: 305 QNLKM 319
+N K+
Sbjct: 186 RNCKL 190
>At5g11150.1 68418.m01303 synaptobrevin / vesicle-associated
membrane protein 713 (VAMP713) identified as AtVAMP713
by Sanderfoot, A.A., et al. in Plant Physiol. 124:
1558-69 (2000); similar to Vesicle-associated membrane
protein 722 (AtVAMP722) Synaptobrevin-related protein 1
(SP:P47192) {Arabidopsis thaliana}; synaptobrevin-like
protein Sybl1, Mus musculus, EMBL:MMU133536
Length = 221
Score = 48.4 bits (110), Expect = 5e-06
Identities = 18/67 (26%), Positives = 43/67 (64%)
Frame = +2
Query: 125 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 304
R+++ + ++ +V +M N++KVL+R ++L L ++ + +Q +F +QA + + WW
Sbjct: 127 RMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWW 186
Query: 305 QNLKMML 325
+N+K+ +
Sbjct: 187 RNVKLTI 193
>At5g22360.1 68418.m02609 synaptobrevin family protein similar to
Synaptobrevin-like protein 1 (SP:P51809) [Homo sapiens]
Length = 221
Score = 47.6 bits (108), Expect = 9e-06
Identities = 22/76 (28%), Positives = 44/76 (57%)
Frame = +2
Query: 98 SSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQA 277
SS P V L + + +V E+ +M N+EK++ER ++ L ++ +Q + F +Q+
Sbjct: 120 SSNPSVDT--LNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQS 177
Query: 278 GKLKRKYWWQNLKMML 325
+L+R W +N K+++
Sbjct: 178 KRLRRALWMKNAKLLV 193
>At3g24890.1 68416.m03121 synaptobrevin-related similar to
SYNAPTOBREVIN-RELATED PROTEIN GB:P47192 from
[Arabidopsis thaliana] (Proc. Natl. Acad. Sci. U.S.A.
(1992) 89(9), 3894-3898); contains Pfam profile PF00957:
synaptobrevin
Length = 114
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = +2
Query: 125 RLAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWW 304
+LA+ +A V ++ G+M N+EK L+R +K+ L + L+ K+ RK W+
Sbjct: 31 KLAKVKALVTKMKGVMMENIEKALDRSEKIKILVD----LRSKYKDIITPGTKITRKMWF 86
Query: 305 QNLKMML 325
QN+K L
Sbjct: 87 QNMKFKL 93
>At2g33110.1 68415.m04059 synaptobrevin family protein similar to
Vesicle-associated membrane protein 722 (AtVAMP722)
Synaptobrevin-related protein 1 (SP:P47192) {Arabidopsis
thaliana}
Length = 217
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/66 (36%), Positives = 36/66 (54%)
Frame = +2
Query: 128 LAQTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYWWQ 307
LA+ +A+V EV +M N+EKVL R L + Q F + ++KRK W+Q
Sbjct: 131 LAKAKAQVSEVKSLMMENIEKVLARGVICEMLGSSESQPQ----AFYIKRTQMKRKKWFQ 186
Query: 308 NLKMML 325
N+K+ L
Sbjct: 187 NMKIKL 192
>At5g58320.2 68418.m07301 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 558
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 164 GIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 295
GIMR VEK D KL L + ++ Q AA ++ +A KR+
Sbjct: 320 GIMRKEVEKSKSDDAKLKSLQDMLESAQKEAAAWKSKASADKRE 363
>At5g58320.1 68418.m07300 kinase interacting protein-related low
similarity to kinase interacting protein 1 [Petunia
integrifolia] GI:13936326
Length = 490
Score = 31.1 bits (67), Expect = 0.80
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 164 GIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRK 295
GIMR VEK D KL L + ++ Q AA ++ +A KR+
Sbjct: 320 GIMRKEVEKSKSDDAKLKSLQDMLESAQKEAAAWKSKASADKRE 363
>At1g46912.1 68414.m05219 F-box family protein-related contains weak
hit to TIGRFAM TIGR01640 : F-box protein interaction
domain; similar to hypothetical protein GI:4589954 from
[Arabidopsis thaliana] contains weak hit to TIGRFAM
TIGR01640 : F-box protein interaction domain;
Length = 312
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 99 VPHQE*ATNAWHKHKPK*MKLLALCVSMSRKFWKETKNC 215
VPH+ T A H K +++ L + + FWKE K C
Sbjct: 21 VPHKVIVTAASFVHLQKWQQVVLLLIPSTSNFWKELKCC 59
>At5g41990.1 68418.m05112 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 563
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/65 (30%), Positives = 27/65 (41%)
Frame = -1
Query: 567 NSCRNIVCVYYKFPLSSRAWSFLNPDPSHNKYFLEYMFKLANYRPTSLGASVTGGAAGDD 388
N CRN +Y K + + S D + F+E A+ RPT+L S A D
Sbjct: 231 NECRNQAQIYKKVTSNIKPQSLGKVDDPQVRQFIEKCLLPASSRPTALELSKDPFLARDG 290
Query: 387 EPDVA 373
D A
Sbjct: 291 GKDSA 295
>At3g10680.1 68416.m01284 heat shock protein-related contains weak
similarity to Pfam profile PF00011: Hsp20/alpha
crystallin family
Length = 490
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 92 GGSSAPRVSDKRLAQTQAKVDEVVGIMRVNVEKVLERD-QKLSELDNRADALQHGAAQFE 268
GGS P+V K + K D+ + ++ +KV E++ + +D R ++ +H +
Sbjct: 249 GGSLKPKVQAKEEKVIERKKDDDISQLKTG-QKVKEKEISRTPTIDARVESKEHAKVVEK 307
Query: 269 QQAGKLKRK 295
++ G++ +K
Sbjct: 308 KEDGEIGQK 316
>At1g79940.1 68414.m09342 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 702
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 498 NPDPSHNKYFLEYMFK 451
NPDP NKYF+E++ K
Sbjct: 131 NPDPEANKYFVEFISK 146
>At1g62110.1 68414.m07008 mitochondrial transcription termination
factor family protein / mTERF family protein contains
Pfam profile PF02536: mTERF
Length = 462
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 153 STLACVCAKRLSLTLGAELPPCSSIFIVYYALFL 52
+ + + +KRL G+ELPP SS+ + LFL
Sbjct: 402 NVIEALMSKRLLGDTGSELPPMSSVLVCTDELFL 435
>At1g58190.1 68414.m06605 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.2
[Lycopersicon pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1784
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +3
Query: 459 YIPKSIYCDWDRGSETTKRDWTKETCNR---RTLYFYMSFTFS---LKNIEKFILFTKVP 620
Y+ K DW +++ W + C+R R + +++ TFS L N+ F F ++
Sbjct: 42 YVNKEYSYDWSNDTKSDCCRWERVECDRTSGRVIGLFLNQTFSDPILINLSLFHPFEELR 101
Query: 621 NKILYNF 641
LY+F
Sbjct: 102 TLNLYDF 108
>At1g33750.1 68414.m04172 terpene synthase/cyclase family protein
similar to DELTA-CADINENE SYNTHASE ISOZYME A GB:Q43714
from [Gossypium arboreum]
Length = 603
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 108 QE*ATNAWHKHKPK*MKLLALCVSMSRKF-WKETKNCRN*IIAQMRCNMGLHSLNSKL 278
+E TNAW K KPK ++ L++ ++ E + R ++ + C + H++ +L
Sbjct: 474 EENQTNAWFKSKPKMLRALSVIFRLTNDIAGFEEEMRRGEVVNGVNCYVKQHNVTKEL 531
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 134 QTQAKVDEVVGIMRVNVEKVLERDQKLSELDNRADALQHGAAQFEQQAGKLKRKYW 301
Q QAK DE+ +M N E++ + L N A+ ++ ++ Q+ L+RK +
Sbjct: 362 QAQAKADEIAKLMHEN-EQLKSVTEDLKRKSNEAE-VESLREEYHQRVATLERKVY 415
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,890,034
Number of Sequences: 28952
Number of extensions: 263095
Number of successful extensions: 797
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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