Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0800
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    28   0.080
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    28   0.080
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   0.98 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   0.98 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   3.0  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.9  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 427 VMAAPPPNYIQITIVSYKSQPAVPTRGP 510
           VM +PP N + +T+  Y+  P++   GP
Sbjct: 135 VMMSPPGNVLNLTMPKYEPNPSIIDPGP 162


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 27.9 bits (59), Expect = 0.080
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 427 VMAAPPPNYIQITIVSYKSQPAVPTRGP 510
           VM +PP N + +T+  Y+  P++   GP
Sbjct: 135 VMMSPPGNVLNLTMPKYEPNPSIIDPGP 162


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 131 TELPPTHPIRLGLALNFSVFYYEILNSPDR 220
           T+  P HP+R+   ++FS   Y+ + + D+
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 131 TELPPTHPIRLGLALNFSVFYYEILNSPDR 220
           T+  P HP+R+   ++FS   Y+ + + D+
Sbjct: 372 TDGEPVHPVRVNTIISFSGERYDFVINADQ 401


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +2

Query: 344 TSDMQG-DGESADAEQKEPAQDGEDQD 421
           T D QG D  SADA + E A   E+ D
Sbjct: 695 TEDAQGGDAPSADAAESEDASRMEEVD 721


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -2

Query: 581 QYQSIILHMIYFP*SKTNSERAVPGPRV 498
           Q ++ I+H+I    S  + +R+ P PRV
Sbjct: 397 QVEAAIVHLIANLPSPGSDQRSTPSPRV 424


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -1

Query: 426 ETSWSSPSCAGSFCSASADSPSPCMSE 346
           E +WSS   A    SA  D  S C SE
Sbjct: 17  ECNWSSGPNATLQSSACTDDLSSCWSE 43


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -1

Query: 417 WSSPSCAGSFCSASADSPSPCMSEVHSV 334
           W+ P C  S C   A S  P  +++  V
Sbjct: 756 WNYPVCWQSNCKKGASSDKPNFTKLIQV 783



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 569 YFGIAF*LLFKKRCLISAPVPPTGPSG 649
           +FG +F L F     + AP+   G  G
Sbjct: 419 FFGRSFTLQFTNETQVGAPIKGPGREG 445


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,720
Number of Sequences: 336
Number of extensions: 2103
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)