Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0800
         (669 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)                     180   1e-45
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)             159   2e-39
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)              45   6e-05
SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.5  
SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.9  

>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
          Length = 248

 Score =  180 bits (437), Expect = 1e-45
 Identities = 89/126 (70%), Positives = 97/126 (76%)
 Frame = +2

Query: 2   KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNF 181
           KVFY KM+GDYHRYL E A G+ RKE  E S  AYK AS  A  EL P+HPIRLGLALNF
Sbjct: 124 KVFYLKMRGDYHRYLVEVAEGDSRKENIEKSREAYKDASAKA-EELSPSHPIRLGLALNF 182

Query: 182 SVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQG 361
           SVFYYEI N P  AC+LAK AFDDAIA LD L +ESYKDSTLIMQLLRDNLTLWTS+   
Sbjct: 183 SVFYYEIENKPPEACKLAKEAFDDAIAVLDNLKDESYKDSTLIMQLLRDNLTLWTSEQDQ 242

Query: 362 DGESAD 379
           +G+  D
Sbjct: 243 EGQDDD 248


>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 309

 Score =  159 bits (385), Expect = 2e-39
 Identities = 80/131 (61%), Positives = 96/131 (73%), Gaps = 2/131 (1%)
 Frame = +2

Query: 2   KVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTE--LPPTHPIRLGLAL 175
           KVFY KMKGDY+RY  E A  + R+E  + ++ AY  A +IA  +  LPPT PIRLGLAL
Sbjct: 94  KVFYLKMKGDYYRYEGEVAGADRRREVVQKAMKAYSEAQEIAEKDPKLPPTDPIRLGLAL 153

Query: 176 NFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDM 355
           NFSVFYYEI+    +AC LAK AFDDAIAELDTLSE+ YKDSTLIMQLLRDNLT+    +
Sbjct: 154 NFSVFYYEIVEDSKQACDLAKKAFDDAIAELDTLSEDQYKDSTLIMQLLRDNLTVVEKAL 213

Query: 356 QGDGESADAEQ 388
           Q   E+ +A +
Sbjct: 214 QAYKEAKEAAE 224



 Score =  131 bits (317), Expect = 4e-31
 Identities = 66/102 (64%), Positives = 78/102 (76%), Gaps = 3/102 (2%)
 Frame = +2

Query: 68  DRKEAAENSLVAYKAASDIAMT---ELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAK 238
           D     E +L AYK A + A T   +L PT PIRLGLALNFSVF+YEI  + + AC+LAK
Sbjct: 204 DNLTVVEKALQAYKEAKEAAETGDGKLAPTDPIRLGLALNFSVFHYEIQENQEEACKLAK 263

Query: 239 AAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGD 364
            AFDDAIAELD+L+E+ YKDSTLIMQLLRDNLTLW+S+ Q D
Sbjct: 264 QAFDDAIAELDSLNEDQYKDSTLIMQLLRDNLTLWSSENQED 305


>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 219

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 17/25 (68%), Positives = 22/25 (88%)
 Frame = +2

Query: 2   KVFYYKMKGDYHRYLAEFATGNDRK 76
           KVFY+K+KGDY+RYLAEF+ G + K
Sbjct: 194 KVFYFKLKGDYYRYLAEFSHGQEHK 218


>SB_24031| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1176

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 17  KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHP 154
           ++K  Y ++L +F      KE AENS  A   A+  A    PP  P
Sbjct: 859 EVKEAYRKWLDDFMKSAREKEIAENSRYASTQAATSAPYASPPPSP 904


>SB_21211| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 428

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +2

Query: 290 YKDSTLIMQLLRDNLTLWTSDMQGDGESADAEQKE 394
           YK++   + LLR+NL    S  +G G S D E ++
Sbjct: 110 YKEAQEDILLLRENLARQRSSFKGQGTSEDLEARQ 144


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,835,685
Number of Sequences: 59808
Number of extensions: 250310
Number of successful extensions: 841
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1729817375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)