Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0798
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    27   0.11 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.3  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.4  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.4  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +3

Query: 180 VCLTFSSLVYSTIKLASESCSCKNSDV 260
           +CL +++ VYS  +++ E+C    SD+
Sbjct: 7   LCLVYATCVYSVSEISEETCETLMSDI 33


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 243 CKNSDVCTYVYRGVNC 290
           C+N  VCT ++ G  C
Sbjct: 347 CQNGGVCTTIHAGHKC 362


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 322 RFESRKENQNKQFTPRYTYVHT 257
           R + +KE  NK  TPR +   T
Sbjct: 140 RMKHKKEQMNKVSTPRSSPAET 161


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 367 FSNLLLFVNYSP 402
           FS +LLF++Y+P
Sbjct: 148 FSEVLLFLDYNP 159


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 263 YVRISWCKLFVLILFPGFKTKFI*NLKSFCLHI 361
           Y  +   ++F L+ F   ++KF  +   FCL+I
Sbjct: 291 YNTVEESRIFGLVTFTPDRSKFRPSSLRFCLNI 323


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 322 RFESRKENQNKQFTPRYTYVHT 257
           R + +KE  NK  TPR +   T
Sbjct: 131 RMKHKKEQMNKVSTPRSSPAET 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,657
Number of Sequences: 336
Number of extensions: 2904
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)