Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0791
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   1.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   4.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.5  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   7.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   7.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.3  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 526 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGNYFC 663
           I +V  + PG+   AS     N ++ S +  G+ V  +  S  Y C
Sbjct: 100 ITEVAPVLPGNYANASSVGSRNPIHTSSYMTGIWVWLINISATYIC 145


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 526 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGNYFC 663
           I +V  + PG+   AS     N ++ S +  G+ V  +  S  Y C
Sbjct: 333 ITEVAPVLPGNYANASSVGSRNPIHTSSYMTGIWVWLINISATYIC 378


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +1

Query: 526 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGNYFC 663
           I +V  + PG+   AS     N ++ S +  G+ V  +  S  Y C
Sbjct: 333 ITEVAPVLPGNYANASSVGSRNPIHTSSYMTGIWVWLINISATYIC 378


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/43 (25%), Positives = 18/43 (41%)
 Frame = +1

Query: 130  EYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 258
            EYPKC+ V  +       +     +R  S     KN ++  A+
Sbjct: 2443 EYPKCWQVDCNKGPDSDKEAFAAFVRELSAAFKPKNLLLSAAV 2485


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +2

Query: 410 LPHCQSSFPPTTPASVQRK-PLSSKLFPSLPKFQRVLLKSSTMYTS 544
           +P  Q + P       Q K PLSS  +PS+    ++L+ S  M  S
Sbjct: 1   MPLLQETTPKRDMLDSQEKTPLSSVSYPSMFTPSQLLMASHLMAAS 46



 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 225 HGKKHYDAQSHQRPPGQQSSPRETVATHQGQRWLRVH 335
           H K H    + +RP   +   R+ V     +R LRVH
Sbjct: 177 HLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 213


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 332 NTKPTLPLMCGNSFSRAGLL 273
           N KP +  +CG S++R   L
Sbjct: 246 NQKPNVCRICGKSYARPSTL 265


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 225 HGKKHYDAQSHQRPPGQQSSPRETVATHQGQRWLRVH 335
           H K H    + +RP   +   R+ V     +R LRVH
Sbjct: 24  HLKTHMRLHTGERPYRCEHCDRQFVQVANLRRHLRVH 60


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 97  NYFVKIIQLLDEYPKCF 147
           N   KI  L+DE+ +CF
Sbjct: 214 NLHNKICNLIDEFNECF 230


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory
          receptor candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 4  SRAFCLVLKFHRSPYATLSR 63
          S  FCLV   HR  Y  LS+
Sbjct: 20 SEIFCLVNFNHRESYFRLSK 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,206
Number of Sequences: 336
Number of extensions: 4438
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)