Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0783
         (658 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    27   0.14 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.72 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   0.96 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   0.96 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   0.96 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   0.96 
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.7  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = +2

Query: 146 ILFIYLYIYTHAYIRSFLIFIVYPISHALARVCRD 250
           +L ++LYI+T+  +  ++ +   PI H  + +  D
Sbjct: 132 VLQLFLYIFTYLSVTCYVTYAWSPIDHTESNIIND 166


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +1

Query: 118 CVVLCVICKYFIYLFIYIYACIHSIVL 198
           CV++ ++C Y+ Y + +I   +H ++L
Sbjct: 230 CVLIILLCIYYFY-YAFILFTVHLLLL 255



 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 115 TCVVLCVICKYFIYLFIYIYACIH 186
           T  +L ++C Y+ Y  + I  CI+
Sbjct: 276 TMHLLFLLCIYYFYCALIILLCIY 299



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 527 LVFLTCVCVRCTTAFYMFIIIYF 595
           L+FL C+       F++  I YF
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYF 149


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 142 KYFIYLFIYIYACI 183
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 142 KYFIYLFIYIYACI 183
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 142 KYFIYLFIYIYACI 183
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 142 KYFIYLFIYIYACI 183
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -3

Query: 119 HVNDPSAGSPTETXXXXXXXLNDQVWS 39
           HV+  S  SPT          N  +WS
Sbjct: 194 HVSTGSTSSPTIASATYTNSANSSIWS 220


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,376
Number of Sequences: 336
Number of extensions: 2467
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)