Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0782
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 252 1e-67
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 246 1e-65
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 200 5e-52
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 166 8e-42
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 97 1e-20
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 84 6e-17
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 81 5e-16
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 80 1e-15
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 76 2e-14
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 3e-11
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 52 2e-07
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06) 39 0.002
SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39) 35 0.046
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 34 0.080
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 32 0.32
SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035) 30 0.98
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 30 1.3
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_3760| Best HMM Match : SVA (HMM E-Value=0.19) 29 2.3
SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_26973| Best HMM Match : DUF471 (HMM E-Value=1.1) 28 4.0
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5) 28 5.3
SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13) 27 6.9
SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38) 27 6.9
SB_43146| Best HMM Match : Ank (HMM E-Value=0) 27 6.9
SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_43957| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.6e-13) 27 9.2
SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56) 27 9.2
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 27 9.2
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 27 9.2
SB_51196| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05) 27 9.2
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 252 bits (617), Expect = 1e-67
Identities = 112/150 (74%), Positives = 126/150 (84%)
Frame = +2
Query: 65 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQ 244
PRVFFD+T+ + G+IV+ELRSDV P T ENFR LCT EKGFGYKGS FHR+IP FM Q
Sbjct: 137 PRVFFDITIGERSAGRIVMELRSDVVPMTAENFRCLCTHEKGFGYKGSSFHRIIPQFMCQ 196
Query: 245 GGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 424
GGDFT HNGTGGKSIYG KFEDENF LKHTG GVLSMAN+G +TNGSQFF+TT KT WLD
Sbjct: 197 GGDFTKHNGTGGKSIYGAKFEDENFVLKHTGAGVLSMANSGPNTNGSQFFLTTEKTDWLD 256
Query: 425 GTHVVFGNVVEGMEVVKQIETFGSQSGKTS 514
G HVVFGNV+EG +VV+++E GSQSGK S
Sbjct: 257 GKHVVFGNVIEGFDVVRKMEAVGSQSGKAS 286
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 246 bits (601), Expect = 1e-65
Identities = 111/147 (75%), Positives = 123/147 (83%)
Frame = +2
Query: 74 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGD 253
+FD+ + AP G+IV+ELR DV PKT ENFRALCTGEKGFGYKGS FHRVIP FM QGGD
Sbjct: 6 YFDIEIGGAPAGRIVMELRDDVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGD 65
Query: 254 FTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGTH 433
FT +GTGGKSIYG KF DENF LKHTGPG+LSMANAG TNGSQFF+ T KTSWLDG H
Sbjct: 66 FTRGDGTGGKSIYGAKFADENFNLKHTGPGILSMANAGPGTNGSQFFLCTAKTSWLDGKH 125
Query: 434 VVFGNVVEGMEVVKQIETFGSQSGKTS 514
VVFG+V +GM+VVK+IE GS SGKTS
Sbjct: 126 VVFGSVKDGMDVVKKIEKVGSDSGKTS 152
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 200 bits (488), Expect = 5e-52
Identities = 89/139 (64%), Positives = 109/139 (78%)
Frame = +2
Query: 68 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQG 247
+V+ DV++ P G++++ L D PKT NF AL E+GFGYK SIFHRVI NFM+QG
Sbjct: 27 KVWMDVSIGGQPAGRVILGLFGDTAPKTVANFVALADKEQGFGYKDSIFHRVIKNFMIQG 86
Query: 248 GDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDG 427
GDFTN +GTGG SIYG F+DENF LKH GPG L MANAG +TNGSQF+ITT+KTSWLDG
Sbjct: 87 GDFTNKDGTGGYSIYGKYFDDENFNLKHYGPGWLCMANAGKNTNGSQFYITTIKTSWLDG 146
Query: 428 THVVFGNVVEGMEVVKQIE 484
+H FG V+EGM+VV++IE
Sbjct: 147 SHTCFGKVLEGMDVVRRIE 165
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 166 bits (404), Expect = 8e-42
Identities = 89/152 (58%), Positives = 104/152 (68%), Gaps = 18/152 (11%)
Frame = +2
Query: 68 RVFFDVTVDDAPLGKI------VIELRSDVTPKTCE-----NFRAL-----CT--GEKGF 193
+VFFD+T+ G+I +I+ + + E NFR CT +KGF
Sbjct: 28 KVFFDITIGGEKAGRIEIGLFVIIKTYYLLATRLVESLIGTNFRYFDTYYCCTIESQKGF 87
Query: 194 GYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGAD 373
GYK SIFHRVI +FM+QGGDFT +GTGGKSIYG KF DENF L+H G G LSMANAG D
Sbjct: 88 GYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGWLSMANAGKD 147
Query: 374 TNGSQFFITTVKTSWLDGTHVVFGNVVEGMEV 469
TNGSQFFITTVKT WLDG HVVFG V++GMEV
Sbjct: 148 TNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 96.7 bits (230), Expect = 1e-20
Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = +2
Query: 266 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGTHVVF 442
+GTGG+SI+G +FEDE + L+H P +SMANAG +TNGSQFFIT V T WLD H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 443 GNVVEGMEVVKQI 481
G VV+GM+V +QI
Sbjct: 62 GRVVKGMDVAQQI 74
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 84.2 bits (199), Expect = 6e-17
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +2
Query: 269 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGTHVVFGN 448
G GG+S+YG FEDE+F++ H GV+ MAN G TNGSQF+IT W+D +V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 449 VVEGMEVVKQIE 484
V+EG+ V+ +E
Sbjct: 106 VIEGLNVLDVLE 117
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 82.6 bits (195), Expect = 2e-16
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +2
Query: 353 MANAGADTNGSQFFITTVKTSWLDGTHVVFGNVVEGMEVVKQIE 484
MANAG DTNGSQFFITTVKTSWLDG HVVFG V+EGM+VV+++E
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLE 44
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 81.0 bits (191), Expect = 5e-16
Identities = 42/74 (56%), Positives = 51/74 (68%)
Frame = +2
Query: 266 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGTHVVFG 445
NGTGG+SIYG F DE F KH P +LSMAN G +TNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFI----------IHVVFG 74
Query: 446 NVVEGMEVVKQIET 487
+V++G E+V+QIE+
Sbjct: 75 HVIQGEELVRQIES 88
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/53 (66%), Positives = 45/53 (84%)
Frame = +2
Query: 326 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGTHVVFGNVVEGMEVVKQIE 484
+H PG+LSMAN+G +TNGSQFFITTV T LDG HVVFG V++GM+VV+++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELE 240
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/46 (71%), Positives = 40/46 (86%)
Frame = +2
Query: 344 VLSMANAGADTNGSQFFITTVKTSWLDGTHVVFGNVVEGMEVVKQI 481
+LSMANAG TNGSQFF+ T KTSWLDG HVVFG+V +GM+VVK++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 65.3 bits (152), Expect = 3e-11
Identities = 51/132 (38%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Frame = +2
Query: 104 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 283
LG+I IEL +D P + NF A + G+ Y G+ FHRVIP FM+QGG F + +
Sbjct: 32 LGEIEIELDADKAPISTANFLAYV--DSGY-YAGTQFHRVIPGFMVQGGGF---DADMQQ 85
Query: 284 SIYGNKFEDENFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKTSWLD-GT----HVVFG 445
++E H G L+MA D+ SQFFI ++LD G+ + VFG
Sbjct: 86 KDTQAPIKNEADNGLHNVRGTLAMARTQVRDSATSQFFINHKDNAFLDHGSRDFGYAVFG 145
Query: 446 NVVEGMEVVKQI 481
VV+GM+VV +I
Sbjct: 146 KVVKGMDVVDKI 157
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 8/46 (17%)
Frame = +2
Query: 107 GKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSIFHR 220
G+++ EL +D PKT ENFRALCTGEKG G YKG FHR
Sbjct: 2 GRVLFELFADKVPKTAENFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +2
Query: 329 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGTHVVFG 445
H G +SMAN G ++NGSQFFI K LD + +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_42464| Best HMM Match : Pro_isomerase (HMM E-Value=3.9e-06)
Length = 454
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/65 (40%), Positives = 35/65 (53%)
Frame = +2
Query: 104 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGK 283
+G I IEL TPK C NF LC +G+ Y +IFHR++ +GG+ N G G
Sbjct: 12 VGDIDIELWGKETPKACRNFIQLCL--EGY-YDNTIFHRIV-----KGGE--NIYGQSGF 61
Query: 284 SIYGN 298
+ GN
Sbjct: 62 KVTGN 66
>SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39)
Length = 432
Score = 34.7 bits (76), Expect = 0.046
Identities = 26/104 (25%), Positives = 46/104 (44%)
Frame = +3
Query: 3 ALSLWWFCKLLTLLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALA 182
ALS C+L L C S +L T E LS V+ + + T+V C L
Sbjct: 326 ALSTTVSCQLKALSTTVSC-----QSKALSTTVSCELKALSTTVSCELKALSTTVSCQLK 380
Query: 183 RKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTR 314
++ +S+ +SC + S T++ ++ ST +S +++
Sbjct: 381 ALSTTVSCELKALSTTVSCQSKALSTTVSCQSKALSTTVSCQSK 424
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/79 (22%), Positives = 38/79 (48%)
Frame = +3
Query: 78 STSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGTS 257
S +L T + LS V+ + + T+V C L ++ +S+ +SC + S
Sbjct: 324 SKALSTTVSCQLKALSTTVSCQSKALSTTVSCELKALSTTVSCELKALSTTVSCQLKALS 383
Query: 258 PTITALGESPSTAISLKTR 314
T++ ++ ST +S +++
Sbjct: 384 TTVSCELKALSTTVSCQSK 402
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 33.9 bits (74), Expect = 0.080
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = -1
Query: 474 FTTSMPSTTFPKTTCVPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 334
FTT PST P T PS+ E +T WEP P PGP
Sbjct: 33 FTTGEPSTWEPMTGA-PSTWEPMTGAPSTWEPWTDGPGPYPTDGPGP 78
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 444 PKTTCVPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 334
P TT PS+ E +T WEP+ AP+ T GP
Sbjct: 32 PFTTGEPSTWEPMTGAPSTWEPMTGAPSTWEPWTDGP 68
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 31.9 bits (69), Expect = 0.32
Identities = 12/19 (63%), Positives = 18/19 (94%)
Frame = +2
Query: 431 HVVFGNVVEGMEVVKQIET 487
HVVFG+V++G E+V+QIE+
Sbjct: 3 HVVFGHVIQGEELVRQIES 21
>SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -1
Query: 456 STTFPKTTCVPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 334
+ FP TT P + + T + EPL+ P +R P P
Sbjct: 19 TAAFPTTTTTPVTTQTTTTDVSRTEPLIELPTAQEKRKPCP 59
>SB_19689| Best HMM Match : VWA (HMM E-Value=0.0035)
Length = 885
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 98 APLGKIVIELRSDVTPKTCENFRALCTG 181
AP I+I L S V+PKT E+ R LC G
Sbjct: 569 APKIDIIIALDSGVSPKTFEDERQLCAG 596
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -3
Query: 139 DVTSQL-NNNFSQWGIVNSDVEEYSW*RHFAGISNVSNLQNHHNDNA 2
DV S L S WGI + D+E+ W + I+ L++ H D+A
Sbjct: 90 DVCSTLFQEELSYWGINDRDMEQCCWAHYKRQINTEETLKSFHLDSA 136
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -1
Query: 492 PKVSICFTTSMPSTTFPKTTCVPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 313
P+ TTS PST+ P+T ++ T N AP+ + RT + LR
Sbjct: 87 PRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSN--STTRAPSTSTPRTGSTITLRTST 144
Query: 312 SS 307
+S
Sbjct: 145 TS 146
>SB_3760| Best HMM Match : SVA (HMM E-Value=0.19)
Length = 259
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = -1
Query: 447 FPKTTCVPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 334
FP+ + +P S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPSLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_30500| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2014
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 177 VHRARKFSHVLGV--TSLLSSITIFPSGASSTVTSKNTRGRDILPV 46
+ + KF+H+ G+ TS T+F +T T TR RD++ +
Sbjct: 168 IQQLHKFTHIHGMLSTSSRGRYTLFRGQYDTTATQIYTRSRDVIDI 213
>SB_26973| Best HMM Match : DUF471 (HMM E-Value=1.1)
Length = 674
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +3
Query: 183 RKASVTRAPFSIVSSPISCCKEGTSPTITALGESP 287
+K R S V SC +EG SPT T+ G++P
Sbjct: 276 KKPFSNREAHSCVELCRSCVREGCSPTPTSRGDAP 310
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = -1
Query: 447 FPKTTCVPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 334
FP+ +P S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPPLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_15696| Best HMM Match : DUF282 (HMM E-Value=2.5)
Length = 128
Score = 27.9 bits (59), Expect = 5.3
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 168 PCALARKASVTRAPFSIVSSPISCCKE-GTSPTITA-LGESPST 293
PCALA SV+ P S VSS + G S TI+A SP T
Sbjct: 48 PCALATAPSVSEVPASTVSSSSPLRRSPGPSGTISASTSGSPRT 91
>SB_55431| Best HMM Match : DnaJ_C (HMM E-Value=7.2e-13)
Length = 278
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 158 NFRALCTGEKGFGYKGSIF 214
NF + TG+KGFG++G F
Sbjct: 67 NFSSYSTGQKGFGFEGMDF 85
>SB_31923| Best HMM Match : DnaJ (HMM E-Value=2.8e-38)
Length = 161
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 158 NFRALCTGEKGFGYKGSIF 214
NF + TG+KGFG++G F
Sbjct: 132 NFSSYSTGQKGFGFEGMDF 150
>SB_43146| Best HMM Match : Ank (HMM E-Value=0)
Length = 282
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 222 TRWKMEPL*PKPFSPVHRARKFSHVLGVTSLL 127
TR+ +EP K F+P+H A ++ HV V LL
Sbjct: 3 TRYPIEPA--KGFTPLHEAARYGHVHIVKLLL 32
>SB_46599| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4482
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 213 SIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASSPWLMPVLILM 380
SIVS+ IS C T P+ T S+ + K I L D ++ P LIL+
Sbjct: 1087 SIVSNRISFCFNFTGPSFTVDTACSSSLTAFKLAIDNLQNGDCEAAIVCAPNLILI 1142
>SB_43957| Best HMM Match : Peptidase_M13_N (HMM E-Value=1.6e-13)
Length = 560
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/52 (23%), Positives = 20/52 (38%)
Frame = -3
Query: 220 TMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDVEEYSW 65
T + L F S RLG + ++L F W +++ E +W
Sbjct: 95 TKDKAVLKALHFYDSCMDKAEIERLGGEPLTKLIKEFGSWAVIDKSWNETNW 146
>SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56)
Length = 1566
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 132 VTSLPRRVKTSVPCALARKASVTRAPFSIVSSPIS 236
VT LP VK + + ASVT P S+ P+S
Sbjct: 1224 VTQLPVSVKHLLTSVMHLHASVTHLPASVTQLPVS 1258
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -1
Query: 471 TTSMPSTTFPKTTCVPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 334
TT+ P TT P+TT P + T + P+ + P T P
Sbjct: 162 TTTTPETTAPRTT-TPETTTPETTTPRTTTPVTTTPRTTTPETTTP 206
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = -1
Query: 492 PKVSICFTTSMPSTTFPKTTCVPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 334
P + TT+ P TT P+TT P + T + P + P +T P
Sbjct: 1771 PPTTTTTTTTTPETTAPRTT-TPETTTPETTTPRTTTPETTKPRTTTPKTTTP 1822
>SB_51196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 365 GADTNGSQFFITTVKTSWLDGTHVVF 442
G D NG+ IT V+++W THV F
Sbjct: 237 GTDENGTFRKITQVQSTWRASTHVRF 262
>SB_18788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 820
Score = 27.1 bits (57), Expect = 9.2
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = -1
Query: 186 FSPVHRARKFSHVLGVTSLLSSITIFPSGASSTVTSKNTRGRDILPVLAM*AIYKTTTMT 7
FSPV+ A F+ L V LL P+GA T G+ + V M + T+
Sbjct: 16 FSPVNLAPTFNGRLQVAILLKGSRHAPTGAVQVPTQPENGGKVSIHVSVMTYAWSLETVA 75
Query: 6 M 4
M
Sbjct: 76 M 76
>SB_12627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 444
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 198 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTL 335
+ A S+ S SC E S + G IS+K+++SPL+ +
Sbjct: 360 SEASVSLTESVSSCSYESGSHLSASPGREEMGEISVKSKVSPLANV 405
>SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05)
Length = 481
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -1
Query: 186 FSPVHRARKFSHVLGVTSLLSSITIFPSGASSTVTSKNTRGRDILPVL 43
+SPVH K + + V + I + + +S+ RG ++L V+
Sbjct: 321 YSPVHNVEKSKNAITVLDTMKKIKVVGTTGQIHFSSEGERGGEMLDVM 368
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,714,355
Number of Sequences: 59808
Number of extensions: 446685
Number of successful extensions: 1512
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -