Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1192
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    27   0.13 
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    26   0.30 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    26   0.30 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    26   0.30 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    26   0.30 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    26   0.30 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           26   0.30 
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    26   0.30 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    26   0.30 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.69 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.69 
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    23   2.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.9  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.9  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   4.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.9  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   4.9  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.5  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    21   8.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.6  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    21   8.6  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 386 LGRELL*SKSDMKACSRWDDRCFEEVHRYSEDSMSFEGGRN 264
           L RE+   K D++   RW DR +  +H   + S++ E GR+
Sbjct: 294 LNREVDQIKQDVEDLKRWSDRIYAAIH---QGSVTDERGRS 331


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YAPPQNSYYPQNTYAPPQ 319
           Y P  NS YP   Y+PPQ
Sbjct: 30  YNPNANSTYPPACYSPPQ 47


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YAPPQNSYYPQNTYAPPQ 319
           Y P  NS YP   Y+PPQ
Sbjct: 30  YNPNANSTYPPACYSPPQ 47


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YAPPQNSYYPQNTYAPPQ 319
           Y P  NS YP   Y+PPQ
Sbjct: 30  YNPNANSTYPPACYSPPQ 47


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YAPPQNSYYPQNTYAPPQ 319
           Y P  NS YP   Y+PPQ
Sbjct: 30  YNPNANSTYPPACYSPPQ 47


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YAPPQNSYYPQNTYAPPQ 319
           Y P  NS YP   Y+PPQ
Sbjct: 30  YNPNANSTYPPACYSPPQ 47


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YAPPQNSYYPQNTYAPPQ 319
           Y P  NS YP   Y+PPQ
Sbjct: 30  YNPNANSTYPPACYSPPQ 47


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YAPPQNSYYPQNTYAPPQ 319
           Y P  NS YP   Y+PPQ
Sbjct: 30  YNPNANSTYPPACYSPPQ 47


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 25.8 bits (54), Expect = 0.30
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 266 YAPPQNSYYPQNTYAPPQ 319
           Y P  NS YP   Y+PPQ
Sbjct: 30  YNPNANSTYPPACYSPPQ 47


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
 Frame = +2

Query: 170 FEPEPAYPVETSKYVERSTQADPADKHLS---QNNYAPPQNSYYPQNTYAPPQN 322
           + PE     E   YV  +T        +S   Q NY  PQ  YY    +   +N
Sbjct: 317 YNPEHTTVNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNKNHPNSEN 370


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
 Frame = +2

Query: 170 FEPEPAYPVETSKYVERSTQADPADKHLS---QNNYAPPQNSYYPQNTYAPPQN 322
           + PE     E   YV  +T        +S   Q NY  PQ  YY    +   +N
Sbjct: 265 YNPEHTTVNEAQPYVRNTTVPTQGVARMSRGRQYNYPNPQQQYYYNKNHPNSEN 318


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -2

Query: 527 NQPFFTSLPLLYWDS*SSLPRLRVFHRRFDTRICNC 420
           N   F  L LLY D  + LP+  +FH   D     C
Sbjct: 350 NPNVFDVLKLLYNDIVNMLPKGEIFHMGGDEVYIPC 385


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +2

Query: 236 PADKHLSQNNYAPPQNSYYPQNTYAPPQNTY 328
           P  +  +QN+Y PP   ++  +     Q  Y
Sbjct: 32  PPSEEYNQNSYIPPGGDFFGNHHIQQQQLQY 62


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +2

Query: 236 PADKHLSQNNYAPPQNSYYPQNTYAPPQNTY 328
           P  +  +QN+Y PP   ++  +     Q  Y
Sbjct: 32  PPSEEYNQNSYIPPGGDFFGNHHIQQQQLQY 62


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 556 YTVHYWARQRTGLTHAY 606
           Y V+YW +Q     H Y
Sbjct: 117 YAVYYWRQQYEDFWHRY 133


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +2

Query: 236 PADKHLSQNNYAPPQNSYYPQNTYAPPQNTY 328
           P  +  +QN+Y PP   ++  +     Q  Y
Sbjct: 32  PPSEEYNQNSYIPPGGDFFGNHHIQQQQLQY 62


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/31 (25%), Positives = 14/31 (45%)
 Frame = +2

Query: 236 PADKHLSQNNYAPPQNSYYPQNTYAPPQNTY 328
           P  +  +QN+Y PP   ++  +     Q  Y
Sbjct: 32  PPSEEYNQNSYIPPGGDFFGNHHIQQQQLQY 62


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 192 QWKPQNTWNAPP 227
           +W P+  W++PP
Sbjct: 118 KWCPRREWSSPP 129


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +3

Query: 192 QWKPQNTWNAPP 227
           +W P+  W++PP
Sbjct: 274 KWCPRREWSSPP 285


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +2

Query: 155 QLVRTFEPEPAYPVETSKYVER 220
           QL+  ++P+  Y  + + Y+E+
Sbjct: 100 QLISVYDPKGEYQTQYAHYLEK 121


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 192 QWKPQNTWNAPPKPIQPINTYPKTIT 269
           QW+     N+P  P++   +Y K +T
Sbjct: 713 QWERTVGHNSPLFPLESATSYQKKLT 738


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +2

Query: 155 QLVRTFEPEPAYPVETSKYVER 220
           QL+  ++P+  Y  + + Y+E+
Sbjct: 100 QLISVYDPKGEYQTQYAHYLEK 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,745
Number of Sequences: 336
Number of extensions: 3264
Number of successful extensions: 30
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)