Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1189
(463 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia nu... 98 9e-20
UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7; C... 59 5e-08
UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein F2... 49 4e-05
UniRef50_Q1DW24 Cluster: Putative uncharacterized protein; n=1; ... 38 0.11
UniRef50_Q2U6I8 Cluster: Predicted protein; n=7; Trichocomaceae|... 37 0.24
UniRef50_Q3S1L4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.56
UniRef50_Q7Z494 Cluster: Nephrocystin-3; n=116; cellular organis... 34 1.3
UniRef50_P34321 Cluster: Uncharacterized protein C07A9.10; n=1; ... 33 4.0
UniRef50_UPI0000E21926 Cluster: PREDICTED: similar to basic prol... 32 5.3
UniRef50_A5N667 Cluster: Putative uncharacterized protein; n=1; ... 32 7.0
UniRef50_A4V7F2 Cluster: Putative uncharacterized protein; n=1; ... 32 7.0
UniRef50_Q0J1T5 Cluster: Os09g0413700 protein; n=6; Magnoliophyt... 32 7.0
UniRef50_P59974 Cluster: Uncharacterized protein Mb2597; n=19; C... 32 7.0
UniRef50_Q7MBC4 Cluster: UDP-N-acetylglucosamine--N-acetylmuramy... 32 7.0
UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to endonuclea... 31 9.2
UniRef50_Q54LI4 Cluster: Putative uncharacterized protein; n=1; ... 31 9.2
UniRef50_Q2H4V9 Cluster: Putative uncharacterized protein; n=4; ... 31 9.2
>UniRef50_A4KWG0 Cluster: Reverse transcriptase; n=3; Ostrinia
nubilalis|Rep: Reverse transcriptase - Ostrinia
nubilalis (European corn borer)
Length = 497
Score = 97.9 bits (233), Expect = 9e-20
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTDDLVKSAGSRWM 462
HIARR DGRWGRK+LEWRPR G+RSVGRPPTRWTDDLVK AGS WM
Sbjct: 428 HIARRADGRWGRKVLEWRPRAGRRSVGRPPTRWTDDLVKVAGSTWM 473
Score = 37.5 bits (83), Expect = 0.14
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 270 KVADIARRISELKWQWAGPHSTKRGRSMGQK 362
+V DIARRI+++KWQWAG + + G+K
Sbjct: 410 RVTDIARRIAKIKWQWAGHIARRADGRWGRK 440
>UniRef50_Q10126 Cluster: Uncharacterized protein F52C9.6; n=7;
Caenorhabditis elegans|Rep: Uncharacterized protein
F52C9.6 - Caenorhabditis elegans
Length = 279
Score = 58.8 bits (136), Expect = 5e-08
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTDDLVKSAGSR 456
H+ARR+DGRW + EWRP KR VGR P RWTD L K +R
Sbjct: 205 HVARRKDGRWTTLMTEWRPWNWKRYVGRTPMRWTDSLRKEITTR 248
>UniRef50_UPI0000E4800E Cluster: PREDICTED: similar to protein
F28E10.3 [imported] - Caenorhabditis elegans; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
protein F28E10.3 [imported] - Caenorhabditis elegans -
Strongylocentrotus purpuratus
Length = 824
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 313 NGPAHIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTDDLVKSAG-SRW 459
N HI+RR D RW I W P GKR+ GR RW D+L + G + W
Sbjct: 363 NWAGHISRRNDNRWSSAITHWTPYEGKRNRGRQRKRWRDELQQFWGQTNW 412
>UniRef50_Q1DW24 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 672
Score = 37.9 bits (84), Expect = 0.11
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Frame = -3
Query: 461 IQRDPALFTRSS-----VHLVGGRPTLRLPVRGRHSRIFLPHRPSSLRAMWAGP 315
+QR PAL R+ + G +P L P+R S LPHR SSLRA A P
Sbjct: 96 LQRPPALSVRTDFGDTRIMAPGSQPDLDAPLRASLSSTSLPHRTSSLRAALAAP 149
>UniRef50_Q2U6I8 Cluster: Predicted protein; n=7;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 378
Score = 36.7 bits (81), Expect = 0.24
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -2
Query: 459 PARPSAFY*VVGPSSRWPSHTALASTWSPLQDLSAPSTVLSSCYV 325
PA PS+ V+ SS W S T A+ SP+QD AP V + +V
Sbjct: 317 PAAPSSSQAVIKSSSSWSSPTVAATPTSPVQDPMAPQRVTVTSFV 361
>UniRef50_Q3S1L4 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 312
Score = 35.5 bits (78), Expect = 0.56
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRP---RTGKRSVGRPPTRWTDDL 435
HI RR+ RW + EW P + KR+VG RW D+
Sbjct: 219 HILRRDPNRWTKICTEWDPSHNKNWKRAVGGQKKRWAKDI 258
>UniRef50_Q7Z494 Cluster: Nephrocystin-3; n=116; cellular
organisms|Rep: Nephrocystin-3 - Homo sapiens (Human)
Length = 1330
Score = 34.3 bits (75), Expect = 1.3
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = -2
Query: 426 GPSSRWPSHTALASTWSPLQDLSAPSTVLSSCYVGRPIATS 304
GP S + L S W LQ ++P+T++ S +VGRP++TS
Sbjct: 531 GPGS---GKSLLLSKWIQLQQKNSPNTLILSHFVGRPMSTS 568
>UniRef50_P34321 Cluster: Uncharacterized protein C07A9.10; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
C07A9.10 - Caenorhabditis elegans
Length = 254
Score = 32.7 bits (71), Expect = 4.0
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 391 KRSVGRPPTRWTDDLVKSAGSRWM 462
KR VG+PP RWTD L K +R M
Sbjct: 14 KRPVGKPPMRWTDSLRKEITTRDM 37
>UniRef50_UPI0000E21926 Cluster: PREDICTED: similar to basic
proline-rich protein; n=1; Pan troglodytes|Rep:
PREDICTED: similar to basic proline-rich protein - Pan
troglodytes
Length = 346
Score = 32.3 bits (70), Expect = 5.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 307 SGNGPAHIARREDGRWGRKILEWRPRTGKRSVGRPP 414
+G P H++ GR GR + W+P+ + VG P
Sbjct: 256 TGRAPPHLSDAVGGRPGRAVHSWKPQKAPKRVGSEP 291
>UniRef50_A5N667 Cluster: Putative uncharacterized protein; n=1;
Clostridium kluyveri DSM 555|Rep: Putative
uncharacterized protein - Clostridium kluyveri DSM 555
Length = 128
Score = 31.9 bits (69), Expect = 7.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 210 HFYRYCYLISDFAMTTLKTNNIKDNQYLIYSQFD 109
HF+R Y+++ A +K+ N KD +Y+IY+Q +
Sbjct: 38 HFFRNTYVVT-IASKQIKSQNNKDIRYIIYTQME 70
>UniRef50_A4V7F2 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas fluorescens SBW25|Rep: Putative
uncharacterized protein - Pseudomonas fluorescens SBW25
Length = 488
Score = 31.9 bits (69), Expect = 7.0
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = -2
Query: 405 SHTALASTWSPLQDLSAPSTVLSSCYVGRPIATSV 301
SH TWSPLQ SAP T L+ +V + SV
Sbjct: 3 SHAQTKQTWSPLQFPSAPLTALTIPHVSAAVQHSV 37
>UniRef50_Q0J1T5 Cluster: Os09g0413700 protein; n=6;
Magnoliophyta|Rep: Os09g0413700 protein - Oryza sativa
subsp. japonica (Rice)
Length = 337
Score = 31.9 bits (69), Expect = 7.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 449 PALFTRSSVHLVGGRPTLRLPVRGRHSRIFLPHRPSSLRAMWAGPLPLQF 300
P T V +VGG + VR + P +++ WAGPLP+ F
Sbjct: 159 PVANTDGEVVVVGGGHAATIAVRAAGKGLIRPSGIAAVAPTWAGPLPIVF 208
>UniRef50_P59974 Cluster: Uncharacterized protein Mb2597; n=19;
Corynebacterineae|Rep: Uncharacterized protein Mb2597 -
Mycobacterium bovis
Length = 884
Score = 31.9 bits (69), Expect = 7.0
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 258 LSSCKVADIARRISELKWQWAG 323
LSS ++AD+A RI + WQW G
Sbjct: 421 LSSAQLADLAVRIEAMPWQWVG 442
>UniRef50_Q7MBC4 Cluster:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase; n=9; Cyanobacteria|Rep:
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)
pyrophosphoryl-undecaprenol N-acetylglucosamine
transferase - Gloeobacter violaceus
Length = 357
Score = 31.9 bits (69), Expect = 7.0
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = -3
Query: 401 TLRLPVRGRHSRIFLPHRPSSLRAMWAGPLPLQFTNSTGYVSNLTTR 261
+L LP G S + LP + A W L L F S YVS TTR
Sbjct: 111 SLNLPAIGHESNV-LPGKVIRYLARWMRSLGLGFAESATYVSGATTR 156
>UniRef50_UPI0000E4A93D Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1253
Score = 31.5 bits (68), Expect = 9.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 370 EWRPRTGKRSVGRPPTRWTDDLVKSAG 450
+W+P+ GK+ GRP +TD L K G
Sbjct: 1200 DWKPKHGKKKPGRPYLTYTDLLKKDTG 1226
>UniRef50_Q54LI4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1087
Score = 31.5 bits (68), Expect = 9.2
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -2
Query: 192 YLISDFAMTTLKTNNIKDNQYLIYSQFDHRL*YYTKEYIIICVC 61
+++S +++ T+N+ N Y Y D+RL Y T E I VC
Sbjct: 493 HIVSRKTNSSITTDNLSVNGYQHYKATDYRLDYNTDESIFYIVC 536
>UniRef50_Q2H4V9 Cluster: Putative uncharacterized protein; n=4;
Sordariomycetes|Rep: Putative uncharacterized protein -
Chaetomium globosum (Soil fungus)
Length = 342
Score = 31.5 bits (68), Expect = 9.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2
Query: 447 SAFY*VVGPSSRWPSHTALASTWSPLQDLSAPSTVLSSCYVGRPIATS 304
SA+ P + S A+ S + P+Q + P T +S Y RP+ S
Sbjct: 179 SAYQPQYAPGPAYMSQPAMTSYYPPMQSAAPPQTQMSGLYYQRPLPQS 226
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,466,553
Number of Sequences: 1657284
Number of extensions: 8428438
Number of successful extensions: 25269
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 24339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25257
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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