Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1189
(463 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_4403| Best HMM Match : AT_hook (HMM E-Value=3.3) 33 0.087
SB_38459| Best HMM Match : DUF948 (HMM E-Value=0.63) 32 0.20
SB_3479| Best HMM Match : PAH (HMM E-Value=4.7) 32 0.20
SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38) 32 0.27
SB_21570| Best HMM Match : AT_hook (HMM E-Value=2) 31 0.35
SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25) 31 0.61
SB_59601| Best HMM Match : AT_hook (HMM E-Value=3.3) 30 0.81
SB_55169| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_52890| Best HMM Match : PH (HMM E-Value=1e-06) 30 0.81
SB_47250| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08) 30 0.81
SB_43044| Best HMM Match : zf-C2H2 (HMM E-Value=0.83) 30 0.81
SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43) 30 0.81
SB_38780| Best HMM Match : Astacin (HMM E-Value=0) 30 0.81
SB_35827| Best HMM Match : zf-C2H2 (HMM E-Value=0.83) 30 0.81
SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06) 30 0.81
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 30 0.81
SB_22340| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_16130| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3) 30 0.81
SB_12945| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_12029| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_8735| Best HMM Match : RVT_1 (HMM E-Value=2.00386e-43) 30 0.81
SB_6798| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_5933| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_4450| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_3826| Best HMM Match : AT_hook (HMM E-Value=3.3) 30 0.81
SB_2170| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07) 30 0.81
SB_54653| Best HMM Match : Peptidase_M24 (HMM E-Value=0.93) 30 0.81
SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43) 30 0.81
SB_49894| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3) 30 0.81
SB_42594| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3) 30 0.81
SB_40440| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_39589| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_37146| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_36046| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3) 30 0.81
SB_30624| Best HMM Match : AT_hook (HMM E-Value=3.3) 30 0.81
SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_27212| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 30 0.81
SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3) 30 0.81
SB_2346| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.81
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_43612| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 1.4
SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_23673| Best HMM Match : DUF855 (HMM E-Value=0.52) 28 4.3
SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37) 27 5.7
SB_6981| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_6928| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 27 10.0
SB_33808| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 27 10.0
SB_21608| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
>SB_4403| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 280
Score = 33.5 bits (73), Expect = 0.087
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTDDLVK 441
H+ R +DGR +++L G R VGRP R+ D L K
Sbjct: 202 HLCRMDDGRVPKQLLFSELEHGSRPVGRPKLRFKDTLKK 240
>SB_38459| Best HMM Match : DUF948 (HMM E-Value=0.63)
Length = 276
Score = 32.3 bits (70), Expect = 0.20
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK + Y +VCV+Y VCV + + +MY+
Sbjct: 87 YKVCFRYYKVCVRYYKVCVRYYKVCVMYY 115
Score = 31.1 bits (67), Expect = 0.46
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCVM+ + + Y+
Sbjct: 108 YKVCVMYYKVCVRYYKVCVMYYKVCVKYY 136
Score = 30.7 bits (66), Expect = 0.61
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCVM+ + + Y+
Sbjct: 94 YKVCVRYYKVCVRYYKVCVMYYKVCVRYY 122
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK + Y +VCV+Y VCV + + + Y+
Sbjct: 45 YKVCFRYYKVCVRYYKVCVRYYKVCVRYY 73
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV Y VCV + + +MY+
Sbjct: 101 YKVCVRYYKVCVMYYKVCVRYYKVCVMYY 129
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 100 LILYKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
++ YK Y +VCV+Y VCV + + + Y+
Sbjct: 7 VMYYKVCVRYYKVCVRYYKVCVRYYKVCIRYY 38
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 3 YKVCVMYYKVCVRYYKVCVRYYKVCVRYY 31
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 52 YKVCVRYYKVCVRYYKVCVRYYKVCIRYY 80
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK + Y +VC +Y VCV + + + Y+
Sbjct: 38 YKVCFRYYKVCFRYYKVCVRYYKVCVRYY 66
Score = 27.9 bits (59), Expect = 4.3
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK + Y +VC +Y VCV + + + Y+
Sbjct: 80 YKVCFRYYKVCFRYYKVCVRYYKVCVRYY 108
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VC+ + + Y+
Sbjct: 17 YKVCVRYYKVCVRYYKVCIRYYKVCFRYY 45
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VC+ + + Y+
Sbjct: 59 YKVCVRYYKVCVRYYKVCIRYYKVCFRYY 87
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 100 LILYKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
++ YK Y +VCV Y VCV + + Y+
Sbjct: 112 VMYYKVCVRYYKVCVMYYKVCVKYYKVCFRYY 143
>SB_3479| Best HMM Match : PAH (HMM E-Value=4.7)
Length = 222
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCVKY VCVM+ + + Y+
Sbjct: 66 YKVCVMYYKVCVKYYKVCVMYYKVCVRYY 94
Score = 30.7 bits (66), Expect = 0.61
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + +MY+
Sbjct: 45 YKVCVRYYKVCVRYYKVCVRYYKVCVMYY 73
Score = 30.7 bits (66), Expect = 0.61
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCVM+ + + Y+
Sbjct: 52 YKVCVRYYKVCVRYYKVCVMYYKVCVKYY 80
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV Y VCV + + +MY+
Sbjct: 59 YKVCVRYYKVCVMYYKVCVKYYKVCVMYY 87
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 80 YKVCVMYYKVCVRYYKVCVRYYKVCVRYY 108
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 100 LILYKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
++ YK Y +VCV+Y VCV + + + Y+
Sbjct: 84 VMYYKVCVRYYKVCVRYYKVCVRYYKVCVRYY 115
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 3 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 31
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 10 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 38
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 17 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 45
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 24 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 52
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 31 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 59
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 38 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 66
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 94 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 122
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 101 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 129
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 108 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 136
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 115 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 143
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 91 YKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
YK Y +VCV+Y VCV + + + Y+
Sbjct: 122 YKVCVRYYKVCVRYYKVCVRYYKVCVRYY 150
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 100 LILYKRVYYYMRVCVKYTVVCVMFLFIDLMYF 5
++ YK Y +VCV Y VCV + + + Y+
Sbjct: 70 VMYYKVCVKYYKVCVMYYKVCVRYYKVCVRYY 101
>SB_56874| Best HMM Match : RVT_1 (HMM E-Value=4.5e-38)
Length = 492
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTDDL---VKSAGSRW 459
H R+ R+ L W P+ GKR GRP W DL K G W
Sbjct: 417 HTLRKPATNITRQSLTWNPQ-GKRKRGRPRNTWRRDLDADAKQMGKTW 463
>SB_21570| Best HMM Match : AT_hook (HMM E-Value=2)
Length = 148
Score = 31.5 bits (68), Expect = 0.35
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTDDL---VKSAGSRW 459
H R+ R+ L W P+ GKR GRP W DL K G W
Sbjct: 90 HTLRKPATNITRQSLTWNPQ-GKRKRGRPRNTWRRDLDADAKHMGKTW 136
>SB_46439| Best HMM Match : RVT_1 (HMM E-Value=4.8e-25)
Length = 1641
Score = 30.7 bits (66), Expect = 0.61
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +1
Query: 358 RKILEWRPRTGKRSVGRPPTRWTDDL---VKSAGSRW 459
R+ L W P+ GKR GRP W DL K G W
Sbjct: 543 RQSLTWNPK-GKRKRGRPRNTWRRDLDADAKHMGKTW 578
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 358 RKILEWRPRTGKRSVGRPPTRWTDDL 435
R+ L W P+ GKR GRP W DL
Sbjct: 183 RQSLTWNPK-GKRKRGRPRNTWRRDL 207
>SB_59601| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 370
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 242 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 276
>SB_55169| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 137
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 7 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 41
>SB_52890| Best HMM Match : PH (HMM E-Value=1e-06)
Length = 449
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 128 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 162
>SB_47250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 7 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 41
>SB_44513| Best HMM Match : Acetyltransf_1 (HMM E-Value=2.7e-08)
Length = 573
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 7 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 41
>SB_43044| Best HMM Match : zf-C2H2 (HMM E-Value=0.83)
Length = 226
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 96 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 130
>SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43)
Length = 677
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 568 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 602
>SB_38780| Best HMM Match : Astacin (HMM E-Value=0)
Length = 1153
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 534 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 568
>SB_35827| Best HMM Match : zf-C2H2 (HMM E-Value=0.83)
Length = 223
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 96 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 130
>SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06)
Length = 530
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 400 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 434
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 848 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 882
>SB_22340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 30.3 bits (65), Expect = 0.81
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRW 423
H+ R + R + L W P G+R GRP T W
Sbjct: 52 HVLRMDQRRIPKVALRWTP-PGRRKPGRPKTTW 83
>SB_16130| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 137
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 7 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 41
>SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 238
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 177 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 211
>SB_12945| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 288
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 158 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 192
>SB_12029| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 192
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 62 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 96
>SB_8735| Best HMM Match : RVT_1 (HMM E-Value=2.00386e-43)
Length = 661
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 531 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 565
>SB_6798| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 318
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 188 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 222
>SB_5933| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 44 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 78
>SB_4450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 280 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 314
>SB_3826| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 238
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 177 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 211
>SB_2170| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 44 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 78
>SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07)
Length = 754
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 96 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 130
>SB_54653| Best HMM Match : Peptidase_M24 (HMM E-Value=0.93)
Length = 1104
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 780 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 814
>SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43)
Length = 458
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 397 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 431
>SB_49894| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 226
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 96 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 130
>SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 328
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 177 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 211
>SB_42594| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 186
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 56 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 90
>SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 290
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 229 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 263
>SB_40440| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 137
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 7 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 41
>SB_39589| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 44 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 78
>SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 212 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 246
>SB_37146| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 44 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 78
>SB_36046| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 44 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 78
>SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 280
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 177 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 211
>SB_30624| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 406
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 96 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 130
>SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 212 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 246
>SB_27212| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 256
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 126 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 160
>SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 416
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 286 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 320
>SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 348
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 229 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 263
>SB_2346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 30.3 bits (65), Expect = 0.81
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 96 HVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 130
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 2488 HVCRMENGRIPKDLLYGELVHGSRPVGRPKLRFKD 2522
>SB_43612| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
H+ R E+GR + +L G R VGRP R+ D
Sbjct: 44 HVCRMENGRIPKDLLYGELVHGSRPVGRPKLRFKD 78
>SB_25340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1105
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 298 LILRAMSATLQLDNNNLNYKFEYYYSSIVT 209
LI+ +M LQ+D N K EYY S+ T
Sbjct: 203 LIMSSMEDLLQIDKKKKNSKSEYYGDSVDT 232
>SB_23673| Best HMM Match : DUF855 (HMM E-Value=0.52)
Length = 380
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRWTD 429
++ R E+GR + +L G R VGRP R+ D
Sbjct: 3 YVCRMENGRIPKDLLYGELAHGSRPVGRPKLRFKD 37
>SB_48322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 169
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 367 LEWRPRTGKRSVGRPPTRW 423
L W P TG+R GRP T W
Sbjct: 11 LRWTP-TGRRKPGRPKTTW 28
>SB_23419| Best HMM Match : zf-A20 (HMM E-Value=1.8e-37)
Length = 1188
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +3
Query: 318 AGPHSTKRGRSMGQKDPGVATTYWQAQCGTATY*MDRRPSKKRW 449
AGP G SMGQ P AQC T +P K +W
Sbjct: 567 AGPQQASVGTSMGQSQP--------AQCATVGCKYQAQPGKGKW 602
>SB_6981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 71
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 367 LEWRPRTGKRSVGRPPTRW 423
L W P TG+R GRP T W
Sbjct: 11 LRWTP-TGRRKPGRPKTTW 28
>SB_6928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 359 LPHRPSSLRAMWAGPLPLQFTNSTGYVSNLTTR 261
LPHRP+ G LQFT S +++L R
Sbjct: 30 LPHRPTVSPVYHIGQQYLQFTKSANSITSLPNR 62
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -2
Query: 450 PSAFY*VVGPSSRWPSHTALASTWSPLQDLSAP 352
PS + + G S W T STW P D P
Sbjct: 38 PSTWEPMTGAPSTWEPMTGAPSTWEPWTDGPGP 70
>SB_33808| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 280
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRW 423
H+ R R + W P GKR GRP T W
Sbjct: 205 HVLRMGQERIPKTSALWTP-IGKRKPGRPKTTW 236
>SB_21608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +1
Query: 325 HIARREDGRWGRKILEWRPRTGKRSVGRPPTRW 423
H+ R R + W P GKR GRP T W
Sbjct: 52 HVLRMGQERIPKTSALWTP-IGKRKPGRPKTTW 83
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,925,888
Number of Sequences: 59808
Number of extensions: 261984
Number of successful extensions: 938
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 945255773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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