Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1183
(577 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28) 35 0.055
SB_23538| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_46824| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.29
SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0) 32 0.29
SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.89
SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 30 1.6
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 29 2.1
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 29 2.7
SB_1296| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_35213| Best HMM Match : Gasdermin (HMM E-Value=4.3) 29 3.6
SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_32268| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_25169| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_4148| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_19442| Best HMM Match : Beach (HMM E-Value=0) 28 6.3
SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_52186| Best HMM Match : IMPDH (HMM E-Value=0) 27 8.3
SB_42627| Best HMM Match : DUF164 (HMM E-Value=0.33) 27 8.3
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
SB_15327| Best HMM Match : EGF (HMM E-Value=7.3) 27 8.3
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 27 8.3
SB_9466| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_15137| Best HMM Match : SRCR (HMM E-Value=4.9e-28)
Length = 327
Score = 34.7 bits (76), Expect = 0.055
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 315 NVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTAT 482
N T++ N SS NN N +S+ N ++ N+N S N ST K+ + T T
Sbjct: 169 NNSTSNSNNSSNNNNSTSNSNNSTSNSNNSTRNNNSSSNNNNSTINNKIVATTTTT 224
Score = 30.7 bits (66), Expect = 0.89
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 315 NVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDT 476
N + S N++ NN N +S+ N ++ N N S N ST TS++
Sbjct: 142 NSTSNSNNSTRNNNNSTSNSNNSTSNSNNSTSNSNNSSNNNNSTSNSNNSTSNS 195
>SB_23538| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 501
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = -1
Query: 538 IPSRF*AFLTFFVFIVSICVAVSLVFTL---GVCVDLVFFKDWLSLSEVGVSFSLLCGIF 368
+P R+ + VF++ I ++V +VF L GV + LV D L +G+S ++ +
Sbjct: 130 LPCRYIVMSVYIVFVLYIVMSVYIVFVLYVIGVPMCLVLTNDCLPCRYIGMSVYIVFVLX 189
Query: 367 NSNT 356
NS+T
Sbjct: 190 NSST 193
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +3
Query: 309 EKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQM 488
EK ++ N +SQNN N ++ N S+N+N S + K+T T T+ TAT
Sbjct: 838 EKKPELSTTNNNSQNNSNSHNNNSNNGNNKNNSNNNNSS-NSKKTTTTVITTTATTATTT 896
Query: 489 ETMKTK 506
T K
Sbjct: 897 TTATAK 902
>SB_46824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +3
Query: 309 EKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQM 488
++N + +SIN +S NN N ++ N+ S+N+N KN + ++
Sbjct: 18 KRNSKDSSINKASYNNSINGNNNNNKSNDNKDSNNNNDRNKNNNNNNNSNNNNNNNNRNQ 77
Query: 489 ETMKTKN 509
+ + N
Sbjct: 78 NNINSNN 84
>SB_14763| Best HMM Match : Zona_pellucida (HMM E-Value=0)
Length = 689
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 315 NVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTAT 482
N + S N S+ NN N +S+ N S+++N S N+ ST T T+ TAT
Sbjct: 579 NSNSNSNNNSNNNN---NNNSNSNSNSNSNSNSNNNSNSNSNSTVTATTTTTATAT 631
>SB_51002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1888
Score = 31.9 bits (69), Expect = 0.39
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +3
Query: 324 TTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMET 494
TTS N ++ +N + +S+NET TSDND S N ++ K +DT + +T
Sbjct: 65 TTSDNDTTSDNDTTSDNDTTSDNET-TSDNDTNS-DNDTTSDNDKTSDNDTTSDNDT 119
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 324 TTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMET 494
T S N ++ +N + +S+N+T TSDND S NT S P +DT + +T
Sbjct: 95 TNSDNDTTSDNDKTSDNDTTSDNDT-TSDNDTTSDNNTTSYNDP-TSDNDTTSDNDT 149
Score = 29.1 bits (62), Expect = 2.7
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +3
Query: 315 NVRTTSINASSQNNVFELNIPHSSENET----PTSDNDNQSLKNTKS---TQTPKVKTSD 473
N +T+ + +S N+ N S N T PTSDND S +T S T + TSD
Sbjct: 105 NDKTSDNDTTSDNDTTSDNDTTSDNNTTSYNDPTSDNDTTSDNDTTSDNDTTSDNETTSD 164
Query: 474 TATQMETMKTKNVRKA*KRD 533
T + T + K D
Sbjct: 165 NDTNSDNDTTSDNDKTTDND 184
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +3
Query: 324 TTSINASSQNNVFELNIPHSSENETPTSD---NDNQSLKNTKSTQTPKVKTSDTATQMET 494
TTS N ++ NN + +S+N+T T++ +DN + + +T T++ AT
Sbjct: 293 TTSDNDTTTNNDTTSDNDATSDNDTTTNNDTTSDNDATSDNDTTSDNDTTTNNDATSDND 352
Query: 495 MKTKN 509
T N
Sbjct: 353 TTTDN 357
Score = 27.5 bits (58), Expect = 8.3
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 324 TTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKS---TQTPKVKTSDTATQMET 494
TTS N ++ +N + +S+N+T T+DN+ S NT S T + TSD T +
Sbjct: 29 TTSDNDTTSDNDTTADNNTTSDNDT-TADNNTTSDNNTTSDNDTTSDNDTTSDNDTTSDN 87
Query: 495 MKTKN 509
T +
Sbjct: 88 ETTSD 92
>SB_36968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/67 (26%), Positives = 38/67 (56%)
Frame = +3
Query: 306 KEKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQ 485
K++N +++S +SQ + SS + + TS + +++K KS++ PK ++S +++
Sbjct: 36 KQRNAQSSSSTETSQRS--RARKRQSSSSSSTTSSSPERNIKK-KSSKAPKRQSSSSSSS 92
Query: 486 METMKTK 506
KTK
Sbjct: 93 SPKRKTK 99
>SB_33336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 30.7 bits (66), Expect = 0.89
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +3
Query: 324 TTSINASSQ---NNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTP-KVKTSDTA-TQM 488
T ++NA + NN L+ +E E ++ND K T++T+TP K K D A T +
Sbjct: 167 TGNLNAEEKYHKNNENVLDASELTEREQKQTENDQLEDKTTQTTETPQKPKQHDVAETNV 226
Query: 489 ETMKTK 506
T + K
Sbjct: 227 NTRRRK 232
>SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 315 NVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTS 470
N + + N ++ NN N H + N + N+N S +T +T TP KT+
Sbjct: 179 NDQNNNHNNNNNNNSNNHN-NHKNNNHNNNNSNNNNSNDHTATTTTPTAKTT 229
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/61 (26%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 303 LKEKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSD-TA 479
+K+K + +IN+S+ NN + N H++ N +++++N N + + ++D TA
Sbjct: 162 IKDKVLVQQNINSSNNNN--DQNNNHNNNNNNNSNNHNNHKNNNHNNNNSNNNNSNDHTA 219
Query: 480 T 482
T
Sbjct: 220 T 220
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -3
Query: 185 CIFDDCKLELEDCSSIIPSCPKLVVTNFRIIF 90
C+ DC + DC +I CP+++ R+I+
Sbjct: 728 CVIYDCPRVIYDCPCVIYDCPRVIYDCPRVIY 759
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 170 CKLELEDCSSIIPSCPKLVVTNFRIIF 90
C L + DC +I CP+++ + R+I+
Sbjct: 838 CPLLIYDCPRVIYGCPRVIYSCHRVIY 864
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 366 LNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQME 491
L +P +N P DN + N ++ PKV S+ T E
Sbjct: 816 LELPRPVDNRKPAETQDNSEVPNKSVSRLPKVVASEPNTANE 857
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 324 TTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKT 503
++S N++S N+ + + ++S E TSDN N + N ++ + K ++ T
Sbjct: 98 SSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDN 157
Query: 504 KN 509
N
Sbjct: 158 SN 159
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 324 TTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKT 503
++S N++S N+ + + ++S E TSDN N + N ++ + K ++ T
Sbjct: 284 SSSDNSNSDNSNTDNSTSNNSNPENSTSDNSNSNNSNQDNSNSDDSKPDNSNTNNSNSDN 343
Query: 504 KN 509
N
Sbjct: 344 SN 345
>SB_1296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 954
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 372 IPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTAT 482
+ HS N+ P S ND +L + +T + TSD T
Sbjct: 660 LSHSDVNQNPDSINDYSTLNGSSLRKTGESSTSDVGT 696
>SB_49862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 293 KTMFERKERQNNIHKCIFSKQRVRIE 370
K + ER+ERQ N+ K I K++ RI+
Sbjct: 413 KELAERRERQENLQKLIKEKEQERID 438
>SB_35213| Best HMM Match : Gasdermin (HMM E-Value=4.3)
Length = 442
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +3
Query: 297 QCLKEKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDT 476
Q E + T + +S N L ++++ TS+N +L+ + +TQ +DT
Sbjct: 172 QATLETSNNTQATLETSNNTQATLETSNNTQATLETSNNTQATLETSNNTQATLENNNDT 231
Query: 477 ATQMET 494
+ET
Sbjct: 232 QATLET 237
>SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 28.7 bits (61), Expect = 3.6
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +3
Query: 336 NASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTA--TQMETMKTKN 509
N + +NVF + E + P + DN+ ++T +++ + K + + ET+ K
Sbjct: 102 NFAFNSNVFLSSAKKGREKKAPKAQRDNERRESTAGSESERDKRKSLSGDVEGETLHLKE 161
Query: 510 VRKA*KRDGICM 545
+ K + IC+
Sbjct: 162 LTPEDKDEDICV 173
>SB_39950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1249
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +3
Query: 315 NVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMET 494
N + N ++ NN N +SS N T++N+N + N + +++
Sbjct: 33 NNNNNNNNNNNNNNTTTNNNSNSSNNNNTTTNNNNSNSSNNNNNNNKNNNNNNSNNNNNN 92
Query: 495 MKTKN 509
T N
Sbjct: 93 SNTNN 97
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 327 TSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSD 473
+S N ++ NN N +++ N T T++N N S N +T +S+
Sbjct: 24 SSSNNNNNNNNNNNNNNNNNNNNTTTNNNSNSSNNNNTTTNNNNSNSSN 72
>SB_32268| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.3 bits (60), Expect = 4.8
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 2/94 (2%)
Frame = +3
Query: 240 DHEYEXXXXXXXXXXXXXXQCLKEKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDN 419
++EYE + KE+ N S+N + NI + +N T N
Sbjct: 18 EYEYEKYGDEEYEDKKYEEEKYKEEEYEDKDWNMKSKNMKTK-NIK-TKKNTTKNMKRKN 75
Query: 420 QSLKN--TKSTQTPKVKTSDTATQMETMKTKNVR 515
KN TK+ +T +KT D MKTKN++
Sbjct: 76 MKTKNMETKNVKTKNMKTKD-------MKTKNIK 102
>SB_25169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +3
Query: 312 KNVRTTSINASS-QNNVFELNIP---HSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTA 479
KN R TS N S+ + N E ++SEN++ T + +++ NTK + T + + + A
Sbjct: 3 KNKRNTSENQSNTKRNTSENRSNTRRNTSENQSNTKRSTSENQSNTKRS-TSENRQTQGA 61
Query: 480 TQMETMKTKN 509
TQM +T++
Sbjct: 62 TQMRIGQTQS 71
>SB_46673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 312 KNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQ 449
KN S N + NN + N +S+NE ++++N++ N + +
Sbjct: 37 KNDNNNSDNENDNNNSYNENDNSNSDNENDNNNSNNENDNNNSNNE 82
>SB_4148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +3
Query: 315 NVRTTSINASSQNNVFELNIPHSSENETPT--SDNDNQSLKNTKSTQTPKVKTSDTATQM 488
N R S N++S NN N ++S N S+N+N+S +N S + S+ +
Sbjct: 43 NNRNNSSNSNSNNNNNNNNRNNNSNNNNSNNNSNNNNRSNRNNNSNNNNRNNNSNNNSNN 102
Query: 489 ETMKTKN 509
N
Sbjct: 103 NNRSNNN 109
>SB_19442| Best HMM Match : Beach (HMM E-Value=0)
Length = 796
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/52 (30%), Positives = 28/52 (53%)
Frame = +3
Query: 309 EKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVK 464
EK + S SS+NN + N +S + + TSD++ S + ++TP +K
Sbjct: 731 EKAKQPESDATSSKNNE-DTNSSSNSASTSSTSDDERSSSQQCDDSKTPPIK 781
>SB_40655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1074
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 372 IPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKTKNV 512
+P NET T N S+K ++ST P++ S T+ T +V
Sbjct: 898 VPSIIINETRTYQNSIVSVKISQSTSEPRIAKSTVYTKQTTNHNAHV 944
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 27.9 bits (59), Expect = 6.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 281 HKKIKTMFERKERQNNIHKCIFS 349
H+K F+RK R NN H+ +F+
Sbjct: 67 HEKYIKFFDRKIRDNNSHRAVFT 89
>SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 27.9 bits (59), Expect = 6.3
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 327 TSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNT-KSTQTPKVKTS 470
T+ N+S +N +IP + NET T ++S+K T K T T ++ S
Sbjct: 227 TNSNSSVSSNSSASSIPSFNPNETFTITPQSESIKKTSKRTSTRQLPAS 275
>SB_52186| Best HMM Match : IMPDH (HMM E-Value=0)
Length = 876
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 333 INASSQNNVFELNIPHSSENET-PTSDNDNQSLKNTKSTQTPKVKTSD 473
IN +Q+++ N S N+ P DND S+ TP+V D
Sbjct: 88 INIDNQDDIPRSNEAGSGNNKVEPPKDNDGGSIVKENEESTPEVPEPD 135
>SB_42627| Best HMM Match : DUF164 (HMM E-Value=0.33)
Length = 412
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +3
Query: 336 NASSQNNVFELNIPHSSENETPTS-DNDNQSLKNTKSTQTP 455
N S +NNV N+P +E +P++ D + L+N Q P
Sbjct: 141 NRSRRNNVIIHNVPEEAEKNSPSAVDFVEKFLRNELEIQQP 181
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 309 EKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQM 488
+KN + N ++ N+ + NI + +NE T+D +N N + T+D +
Sbjct: 76 DKNNNDDNNNKTNDNDTNDENI--NDDNEKNTNDKNNNDDSNENTNDDNDKNTNDDNDKK 133
Query: 489 ETMKTKN 509
K KN
Sbjct: 134 NDDKDKN 140
>SB_15327| Best HMM Match : EGF (HMM E-Value=7.3)
Length = 292
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Frame = +3
Query: 318 VRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNT-----KSTQTPKVKTSDTAT 482
V T+ N S NNV + + + ++N+ +NDN ++ T T T K+ T T
Sbjct: 6 VTMTNDNDSDNNNVHDNDNDNDNDNDNDDGNNDNDTITITMIMAMTMTMTMKMTMKMTMT 65
Query: 483 QMET 494
+ T
Sbjct: 66 MIMT 69
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 113 QPILDK-RELWKNSLQVLIYSHRKCNYWKA 199
+PI+D +E+W L+ + + RK WKA
Sbjct: 53 RPIIDNLQEMWNQELRTAVNTGRKPRLWKA 82
>SB_9466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 369 NIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKTK 506
N+ HS ENE T+ + T +T T T+ A T KTK
Sbjct: 54 NLGHSGENEITTTTTTTIT-TTTTTTTTTTTTTTTAAAAATTTKTK 98
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,078,485
Number of Sequences: 59808
Number of extensions: 337442
Number of successful extensions: 1419
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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