Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1181
(611 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 152 2e-37
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 152 2e-37
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 152 2e-37
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 152 2e-37
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 147 4e-36
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 147 4e-36
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 147 6e-36
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 147 6e-36
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 135 2e-32
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 128 3e-30
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 117 5e-27
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 106 1e-23
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 86 2e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 73 2e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 62 2e-10
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 56 2e-08
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 44 8e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 2e-04
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 39 0.003
At5g43500.2 68418.m05318 expressed protein 33 0.15
At5g43500.1 68418.m05319 expressed protein 33 0.15
At1g69270.1 68414.m07941 leucine-rich repeat family protein / pr... 30 1.1
At5g46330.1 68418.m05703 leucine-rich repeat transmembrane prote... 30 1.4
At4g30340.1 68417.m04312 diacylglycerol kinase family protein co... 29 1.8
At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate 1-p... 29 1.8
At4g00750.1 68417.m00102 dehydration-responsive family protein s... 29 3.2
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 29 3.2
At2g39440.1 68415.m04841 expressed protein 29 3.2
At3g18640.1 68416.m02368 zinc finger protein-related contains si... 28 4.2
At2g42760.1 68415.m05295 expressed protein 28 4.2
At1g29690.1 68414.m03628 expressed protein 28 4.2
At2g18730.1 68415.m02181 diacylglycerol kinase, putative contain... 28 5.6
At5g49970.2 68418.m06187 pyridoxamine 5'-phosphate oxidase-relat... 27 7.4
At5g49970.1 68418.m06188 pyridoxamine 5'-phosphate oxidase-relat... 27 7.4
At2g26340.1 68415.m03160 expressed protein 27 7.4
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 27 9.8
At4g32620.1 68417.m04644 expressed protein predicted protein T10... 27 9.8
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 27 9.8
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 27 9.8
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 152 bits (369), Expect = 2e-37
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKS 362
Query: 328 EYDESGPSIVHRKCF 284
EYDESGPSIVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ GIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 270 GMEA-PGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 152 bits (369), Expect = 2e-37
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 328 EYDESGPSIVHRKCF 284
EYDESGPSIVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ AGIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 270 GMEN-AGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 152 bits (369), Expect = 2e-37
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 328 EYDESGPSIVHRKCF 284
EYDESGPSIVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ AGIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 270 GMEA-AGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 152 bits (369), Expect = 2e-37
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 328 EYDESGPSIVHRKCF 284
EYDESGPSIVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ AGIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 270 GMEN-AGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 147 bits (357), Expect = 4e-36
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 303 GGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKA 362
Query: 328 EYDESGPSIVHRKCF 284
EYDE+GP IVHRKCF
Sbjct: 363 EYDEAGPGIVHRKCF 377
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ AGIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 270 GMEA-AGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 147 bits (357), Expect = 4e-36
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 303 GGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKA 362
Query: 328 EYDESGPSIVHRKCF 284
EYDE+GP IVHRKCF
Sbjct: 363 EYDEAGPGIVHRKCF 377
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ AGIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 270 GMEA-AGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 147 bits (356), Expect = 6e-36
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 328 EYDESGPSIVHRKCF 284
EYDESGPSIVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ GIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 270 GMEN-PGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 147 bits (356), Expect = 6e-36
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTM+ GI DRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 328 EYDESGPSIVHRKCF 284
EYDESGPSIVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ GIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 270 GMEN-PGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 135 bits (326), Expect = 2e-32
Identities = 59/75 (78%), Positives = 67/75 (89%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTM+PGIADRM KEI ALAP +MKIK++APPERKYSVW+GGSILASLS+F MWI+K
Sbjct: 304 GGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKA 363
Query: 328 EYDESGPSIVHRKCF 284
EYDE G +IVHRKCF
Sbjct: 364 EYDEQGGAIVHRKCF 378
Score = 57.6 bits (133), Expect = 6e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ +GIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 271 GMET-SGIHETTYNSIMKCDVDIRKDLYGNIVLS 303
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 128 bits (309), Expect = 3e-30
Identities = 56/75 (74%), Positives = 67/75 (89%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 329
GGTTM+ GI +RM KEI ALA + M+IKI+APPERKYSVWIGGSILASLST++QMWI+K
Sbjct: 255 GGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKA 314
Query: 328 EYDESGPSIVHRKCF 284
EY+E+GP+IVH KCF
Sbjct: 315 EYEENGPAIVHTKCF 329
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ +GIHE TYNSIMK D DIRKDLY N VLS
Sbjct: 222 GMET-SGIHEKTYNSIMKCDDDIRKDLYGNIVLS 254
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 117 bits (282), Expect = 5e-27
Identities = 51/76 (67%), Positives = 62/76 (81%)
Frame = -2
Query: 514 IVGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 335
+ GGTTM GI +RM KE+ AL PS+MK+K++ PPE + SVWIGGSILASLSTF QMWI+
Sbjct: 290 MTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWIT 349
Query: 334 KQEYDESGPSIVHRKC 287
K EY+E G +IVHRKC
Sbjct: 350 KDEYEEHGAAIVHRKC 365
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
G ES +GIHE T NSI+K VD R+D+Y N +++
Sbjct: 259 GKES-SGIHEATRNSILKCPVDTRRDMYGNILMT 291
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 106 bits (254), Expect = 1e-23
Identities = 49/59 (83%), Positives = 55/59 (93%)
Frame = -2
Query: 508 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 332
GGTTM+ GIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 303 GGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = -3
Query: 609 GMESLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
GME+ AGIHETTYNSIMK DVDIRKDLY N VLS
Sbjct: 270 GMEA-AGIHETTYNSIMKCDVDIRKDLYGNIVLS 302
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.2 bits (204), Expect = 2e-17
Identities = 37/79 (46%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Frame = -2
Query: 514 IVGGTTMYPGIADRMQKEITALAPSTMKIKIIAP---PERKYSVWIGGSILASLSTFQQM 344
+ GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQM
Sbjct: 362 LAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQM 421
Query: 343 WISKQEYDESGPSIVHRKC 287
W SK EY+E G S + RKC
Sbjct: 422 WFSKSEYEEHGASYIQRKC 440
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -3
Query: 600 SLAGIHETTYNSIMKWDVDIRKDLYANTVLS 508
S+ G+ SI K DVDIR++LY++ +L+
Sbjct: 333 SVRGLPHMVMESINKCDVDIRRELYSSILLA 363
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 72.5 bits (170), Expect = 2e-13
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Frame = -2
Query: 514 IVGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTF 353
+ GGTT G R QKE L S ++ ++ PPE YS W+GG+ILA +
Sbjct: 282 LCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFP 340
Query: 352 QQMWISKQEYDESGPSIVHRKCF 284
Q ++K +YDE+GPS+VHRKCF
Sbjct: 341 QNQHVTKADYDETGPSVVHRKCF 363
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = -2
Query: 514 IVGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 335
+ GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F+ M ++
Sbjct: 344 LTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVT 403
Query: 334 KQEYDESGPSIVHRKCF 284
K EY+E G + R+ F
Sbjct: 404 KAEYEELGSARCRRRFF 420
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 55.6 bits (128), Expect = 2e-08
Identities = 30/93 (32%), Positives = 58/93 (62%), Gaps = 13/93 (13%)
Frame = -2
Query: 532 LVRQHRIV-GGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAPPERKYSVW 389
++ QH ++ GG+TMYPG+ R++KEI T L + ++++I PP RK+ V+
Sbjct: 293 MLYQHIVLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVY 352
Query: 388 IGGSILAS-LSTFQQMWISKQEYDESGPSIVHR 293
+GG++LA + + WI++++Y E G + +++
Sbjct: 353 LGGAVLAGIMKDAPEFWINREDYMEEGINCLNK 385
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 44.0 bits (99), Expect = 8e-05
Identities = 19/67 (28%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = -2
Query: 514 IVGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW 341
+ GG+ PG+++R+++E+ PS++ I++I PP + W G ++++LS F W
Sbjct: 397 LTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPW 456
Query: 340 -ISKQEY 323
I+++++
Sbjct: 457 CITRKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/45 (35%), Positives = 31/45 (68%)
Frame = -2
Query: 436 MKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 302
+++ +++ P ++++VW GGS+L+S F +K+EY+E G SI
Sbjct: 372 VEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = -2
Query: 514 IVGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 335
+ GG ++ PG+ +R++ I + P I ++ + W G S A+ F +
Sbjct: 643 MTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFT 702
Query: 334 KQEYDESG 311
K +YDE G
Sbjct: 703 KMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 517 RIVGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQ 350
+++GG + G+ +++ + P T I + + E ++ W GG+IL L +
Sbjct: 487 QLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGR 546
Query: 349 QMWISKQEYDESG 311
+ WI + ++ +G
Sbjct: 547 EAWIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = -2
Query: 517 RIVGGTTMYPGIADRMQKEITALAPSTMKIKII----APPERKYSVWIGGSILASLSTFQ 350
+++GG + G+ +++ + P T I + + E ++ W GG+IL L +
Sbjct: 499 QLIGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGR 558
Query: 349 QMWISKQEYDESG 311
+ WI + ++ +G
Sbjct: 559 EAWIERHQWMVNG 571
>At1g69270.1 68414.m07941 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 540
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 386 DPYGVLPLWRSNDLNLHCRW-GESCD 460
DP GVL W S+ + HC W G SC+
Sbjct: 45 DPNGVLSSWVSDSSSNHCSWYGVSCN 70
>At5g46330.1 68418.m05703 leucine-rich repeat transmembrane protein
kinase, putative
Length = 1173
Score = 29.9 bits (64), Expect = 1.4
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 380 STDPYGVLPLWRSNDLNLHCRW-GESCDFLLHTVGDS 487
S DP GVL W HC W G +CD H V S
Sbjct: 42 SNDPLGVLSDWTIIGSLRHCNWTGITCDSTGHVVSVS 78
>At4g30340.1 68417.m04312 diacylglycerol kinase family protein
contains INTERPRO domain, IPR001206, DAG-kinase
catalytic domain
Length = 374
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 389 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVHGGT 505
P GV+PL NDL+ WG S F + +H T
Sbjct: 192 PVGVIPLGTGNDLSRSFSWGGSFPFAWRSAMKRTLHRAT 230
>At1g20950.1 68414.m02623 pyrophosphate--fructose-6-phosphate
1-phosphotransferase-related / pyrophosphate-dependent
6-phosphofructose-1-kinase-related similar to
pyrophosphate--fructose 6-phosphate 1-phosphotransferase
alpha subunit SP:Q41140 from [Ricinus communis]
Length = 614
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 443 WGESCDFLLHTVGDSRVHGGTTDNTVLAYKSLRMSTSHFMME 568
W + + L ++G +H D AY LR + F+ME
Sbjct: 493 WSQDASYTLTSIGRPAIHPAMVDLKGKAYDLLRQNAQKFLME 534
>At4g00750.1 68417.m00102 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -1
Query: 425 DHCSSREEVLRMDRWIDPRLPLYLPTDVDLETGVRRV 315
D C + +L MDR + P+ + + D+D+ T V+++
Sbjct: 555 DRCDMEDILLEMDRILRPKGSVIIRDDIDVLTKVKKI 591
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = -2
Query: 568 LHHEVGRGHP*GLVRQHRIVGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 395
++ E+ HP L G + +YP ++K+ L ++ K + PP+RK++
Sbjct: 340 IYREILEYHPQLLKDYMNSEGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKHA 397
>At2g39440.1 68415.m04841 expressed protein
Length = 773
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 335 RDP-HLLEGREGGEDRSTDPYGVLPLWRSNDLNLHCRWGESCD 460
R+P G E GEDR DP + + R NDL + + + D
Sbjct: 39 REPGEFAAGMEEGEDRPIDPISDIDITRINDLMFNSNFRAAAD 81
>At3g18640.1 68416.m02368 zinc finger protein-related contains
similarity to zinc finger proteins (CCCH type)
Length = 676
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 530 CTPTPYCRWYHHVPWNRRPYAKGNHSSRPIDNED*DHCSSREEVLRMD 387
C YCR+ HHV ++P N+ R +N + +V R+D
Sbjct: 230 CRNGKYCRFSHHVADRKQPQDNNNNFYRQDNNNHTSGHNKWNDVERLD 277
>At2g42760.1 68415.m05295 expressed protein
Length = 267
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 464 GNHSSRPIDNED*DHCSSREEVLRMDRWIDPRLPL-YLPTDVDLETGVRRVW 312
GN ++RP +E DHC R+ ++ I R+P ++VDL+ + R+W
Sbjct: 207 GNRAARPYLSEAWDHCGGRKGKKQITPEIKWRVPAPAAASEVDLKDNL-RLW 257
>At1g29690.1 68414.m03628 expressed protein
Length = 561
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 597 LAGIHETTYNSIMKWDVDIRKDLYANTVLSVVPPCTL 487
L+G+H T + WD + L+ + S VP CT+
Sbjct: 443 LSGVHIVTGAQLGVWDFGSKNVLHLKLLFSKVPGCTI 479
>At2g18730.1 68415.m02181 diacylglycerol kinase, putative contains
INTERPRO domain, IPR001206, DAG-kinase catalytic domain
Length = 488
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 389 PYGVLPLWRSNDLNLHCRWGESCDFLLHTVGDSRVH 496
P GV+PL NDL+ WG S F + +H
Sbjct: 189 PVGVIPLGTGNDLSRSFGWGGSFPFAWRSAVKRTLH 224
>At5g49970.2 68418.m06187 pyridoxamine 5'-phosphate oxidase-related
contains weak similarity to Pyridoxamine 5'-phosphate
oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx).
(Swiss-Prot:P28225) [Shigella flexneri]
Length = 466
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = -2
Query: 520 HRIVGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 407
H +GG + P +A++ + E+ + ++M ++I PP+
Sbjct: 266 HHFLGGRFVPPSVAEKYKLELPSYPGTSMCVRIGKPPK 303
>At5g49970.1 68418.m06188 pyridoxamine 5'-phosphate oxidase-related
contains weak similarity to Pyridoxamine 5'-phosphate
oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx).
(Swiss-Prot:P28225) [Shigella flexneri]
Length = 530
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = -2
Query: 520 HRIVGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 407
H +GG + P +A++ + E+ + ++M ++I PP+
Sbjct: 277 HHFLGGRFVPPSVAEKYKLELPSYPGTSMCVRIGKPPK 314
>At2g26340.1 68415.m03160 expressed protein
Length = 230
Score = 27.5 bits (58), Expect = 7.4
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -3
Query: 327 STTSLAPPLYTGSASKRTARRCLQRPRPAAQFRLVISVNLIVRKILL 187
+T SL PL++ S K+ P P Q R VISV+ + ++LL
Sbjct: 6 ATVSL--PLFSNSNHKKLTCAATLSPPPWKQSRRVISVSFFLSRLLL 50
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -2
Query: 463 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 317
EI+ L P + +KI+A K V I S+L+ F MW+ K +YD+
Sbjct: 3 EISGL-PDDLLVKILAFLPTK--VAISTSVLSKQWRFLWMWLPKLKYDD 48
>At4g32620.1 68417.m04644 expressed protein predicted protein
T10M13.8, Arabidopsis thaliana
Length = 1544
Score = 27.1 bits (57), Expect = 9.8
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +2
Query: 377 RSTDPYGV--LPLWRSNDLNLHCRWGESCDFLL 469
+S DP GV LP+ S DL L C W ES F L
Sbjct: 572 KSPDP-GVEFLPIEDSGDLELCCPWNESEQFEL 603
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 437 CRWGESCDFLLHTV--GDSRVHGGTTDNTVLAYKSLRMSTSH 556
C G C+ LL+ GDSRV G N K++++ST H
Sbjct: 155 CLVGIVCNGLLYVANAGDSRVVLGKVANPFKELKAVQLSTEH 196
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 437 CRWGESCDFLLHTV--GDSRVHGGTTDNTVLAYKSLRMSTSH 556
C G C+ LL+ GDSRV G N K++++ST H
Sbjct: 155 CLVGIVCNGLLYVANAGDSRVVLGKVANPFKELKAVQLSTEH 196
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,750,462
Number of Sequences: 28952
Number of extensions: 299018
Number of successful extensions: 857
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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