Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1177
         (614 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    51   2e-05
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    40   0.062
UniRef50_A1D765 Cluster: Cyclin-like protein (Clg1), putative; n...    36   0.77 
UniRef50_Q54U19 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q50D78 Cluster: Anti-Mullerian hormone; n=3; Danio reri...    32   9.4  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 51.2 bits (117), Expect = 2e-05
 Identities = 21/25 (84%), Positives = 23/25 (92%)
 Frame = +1

Query: 193 FLMLRWVDDLTAHLVLSGYWSHGHL 267
           FL+LRWVD+LTAHLVLSGYWS  HL
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSPRHL 178


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 39.5 bits (88), Expect = 0.062
 Identities = 17/27 (62%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
 Frame = +1

Query: 358 YCFTAEVGSR---WYLPARTHKRSYHQ 429
           + F   +GSR   WYLPARTHKRSYH+
Sbjct: 559 HAFRRRLGSRAEWWYLPARTHKRSYHR 585


>UniRef50_A1D765 Cluster: Cyclin-like protein (Clg1), putative; n=9;
           Eurotiomycetidae|Rep: Cyclin-like protein (Clg1),
           putative - Neosartorya fischeri (strain ATCC 1020 / DSM
           3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
           1020 / DSM 3700 / NRRL 181))
          Length = 475

 Score = 35.9 bits (79), Expect = 0.77
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
 Frame = -3

Query: 543 GFASFLCYVSSKWSAYVVILPEQKHHCIS*-NTVGTHSYLVVGPLVSPRG*VPP 385
           GFAS+L +  + W A  V   ++ HH ++  +T  +  ++V  PL+SP G +PP
Sbjct: 301 GFASWLSHWET-WRAKAVARAQESHHTLAPIDTNVSRGHMVSKPLLSPEGPIPP 353


>UniRef50_Q54U19 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 633

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 381 QPVVPTRADSQEVLPPDMNAFPLYFSLYSDVSVL 482
           QP+    AD Q++L P  NA PLY + YS+ S+L
Sbjct: 420 QPIAS--ADDQQMLVPTANASPLYSNQYSEKSIL 451


>UniRef50_Q50D78 Cluster: Anti-Mullerian hormone; n=3; Danio
           rerio|Rep: Anti-Mullerian hormone - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 549

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 211 VDDLTAHLVLSGYWSHGHLQCKCATHLE 294
           + + T  L+++G WSHGH+  K  T +E
Sbjct: 190 ISEFTRFLIVTGGWSHGHIHLKLKTMVE 217


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,941,941
Number of Sequences: 1657284
Number of extensions: 11873073
Number of successful extensions: 25324
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25317
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)