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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1177
         (614 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_2049| Best HMM Match : Ribosomal_LX (HMM E-Value=0.98)              33   0.14 
SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077)            31   0.74 
SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024)              31   0.74 
SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.7  
SB_39312| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.0  
SB_26753| Best HMM Match : BTK (HMM E-Value=3.9)                       29   4.0  
SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.0  
SB_10782| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.2  
SB_46286| Best HMM Match : Astacin (HMM E-Value=9e-15)                 28   6.9  
SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)                     28   6.9  
SB_18705| Best HMM Match : DUF718 (HMM E-Value=2.3)                    27   9.1  
SB_58072| Best HMM Match : Protamine_P2 (HMM E-Value=7.2)              27   9.1  

>SB_2049| Best HMM Match : Ribosomal_LX (HMM E-Value=0.98)
          Length = 731

 Score = 33.5 bits (73), Expect = 0.14
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -3

Query: 555 HGVCGFASFLCYVSSKWSAYVVILPEQKHHCIS*NT 448
           HGVCGF  F+         Y  I   Q H CIS N+
Sbjct: 161 HGVCGFLQFIVVTHDALRVYHQIARHQPHSCISWNS 196


>SB_46293| Best HMM Match : Keratin_B2 (HMM E-Value=0.00077)
          Length = 677

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 310 SQYSYNGCPTLQTETRYCFTAEVGSRWYLPART 408
           S+   N C   +T+  +C T+++ S WY P +T
Sbjct: 185 SKTQANWCHPYKTQANWCHTSKIQSNWYHPNKT 217



 Score = 27.5 bits (58), Expect = 9.1
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 343 QTETRYCFTAEVGSRWYLPARTHKRSYH 426
           +T+   C   ++ + WY P++T    YH
Sbjct: 90  ETQAYLCHPTKIQANWYHPSKTQANLYH 117



 Score = 27.5 bits (58), Expect = 9.1
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +1

Query: 343 QTETRYCFTAEVGSRWYLPARTHKRSYH 426
           +T+   C   ++ + WY P++T    YH
Sbjct: 622 ETQAYLCHPTKIQANWYHPSKTQANLYH 649


>SB_3680| Best HMM Match : Keratin_B2 (HMM E-Value=0.0024)
          Length = 180

 Score = 31.1 bits (67), Expect = 0.74
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +1

Query: 310 SQYSYNGCPTLQTETRYCFTAEVGSRWYLPART 408
           S+   N C   +T+  +C T+++ S WY P +T
Sbjct: 30  SKTQANWCHPYKTQANWCHTSKIQSNWYHPNKT 62


>SB_57888| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 565

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 325 NGCPTLQTETRYCFTAEVGSRWYLPARTHKRSYH 426
           N C   +T+   C   +  + WY P++T    YH
Sbjct: 445 NWCHPTKTQANLCHPTKTQANWYHPSKTQANWYH 478



 Score = 28.3 bits (60), Expect = 5.2
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +1

Query: 325 NGCPTLQTETRYCFTAEVGSRWYLPARTHKRSYH 426
           N C   +T+   C   +  + WY P++T    YH
Sbjct: 325 NWCHPTKTQACLCHPTKTQANWYHPSKTQVNWYH 358


>SB_39312| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 144

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
 Frame = -3

Query: 585 CGFGGSGNATHGV--CGFASFLCYVSSKWS 502
           CGFGG G+   G+  C +   +CY +S+ S
Sbjct: 54  CGFGGRGSPVDGLDKCCYVHDMCYKASRTS 83


>SB_26753| Best HMM Match : BTK (HMM E-Value=3.9)
          Length = 194

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -3

Query: 195 KKNFSNFDIKSHDYFTTAKLSFLEAQPQSLVLQCALFKLMKGHQIFITSIEHSVIKC 25
           +KN S F + + ++F ++K      +P SL   CA  ++   H I IT   H++I C
Sbjct: 70  RKNLSTFPVYTSNFFLSSKTRPCR-RPLSL---CAS-RVQPRHDITITCASHTIIAC 121


>SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 351

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 527 KNEAKPQTPWVALPEPPNP 583
           +N A PQ P  A+P+PPNP
Sbjct: 269 QNPAIPQLPNPAIPQPPNP 287


>SB_10782| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 399

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +1

Query: 127 EETQLCSCKIIMALYIEIREVFFLMLRWVD-DLTAHLVLSGYW 252
           ++ +L + ++I + Y+   + F L ++ ++ DLTA ++LSG W
Sbjct: 129 KKRKLVTTQVIKSFYVTKGKAFSLSVQRLEADLTADMLLSGSW 171


>SB_46286| Best HMM Match : Astacin (HMM E-Value=9e-15)
          Length = 244

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 457 LKYSGNAFISGGRTSCESARVGTTGCL 377
           + Y GNAF S GR +  + + G + C+
Sbjct: 216 MHYQGNAFSSNGRATITAKQSGVSSCI 242


>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 937

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 323 TTAAP-PFKPKRVTASRLK*AAGGTYPRGLTRGPTTR 430
           TT+ P P +P R T++R +  A    PR  + GP  R
Sbjct: 381 TTSVPAPVRPSRTTSTRARERADRELPRRHSHGPNER 417


>SB_18705| Best HMM Match : DUF718 (HMM E-Value=2.3)
          Length = 650

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -3

Query: 171 IKSHDYFTTAKLSFLEAQPQSLVLQCALFKLMKGHQIFITSIEHSVIK 28
           +K H  F   K    E Q    + +C LF+ +K HQ+F    EH V +
Sbjct: 488 LKEHQVFQYLK----EHQVFQNLKECQLFQYLKEHQVFQYLKEHQVFQ 531


>SB_58072| Best HMM Match : Protamine_P2 (HMM E-Value=7.2)
          Length = 187

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 340 LQTETRYCFTAEVGSRWYLPARTHKRSYHQ 429
           L +ET   FT    +R+Y P R HKR Y Q
Sbjct: 34  LPSETPSAFTLRGSNRFY-PQRLHKRFYRQ 62


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,678,486
Number of Sequences: 59808
Number of extensions: 378883
Number of successful extensions: 771
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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