Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1172
(604 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 203 8e-53
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 203 8e-53
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 203 8e-53
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 202 2e-52
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 202 2e-52
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 202 2e-52
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 200 9e-52
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 199 2e-51
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 194 3e-50
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 193 8e-50
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 2e-48
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 182 3e-46
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 134 5e-32
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 118 5e-27
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 1e-24
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 99 3e-21
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 76 2e-14
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 76 2e-14
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 72 3e-13
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 66 3e-11
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 51 8e-07
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 51 8e-07
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 41 7e-04
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 40 0.002
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 29 3.8
SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_37815| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 28 5.1
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 28 6.7
SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35) 27 8.8
SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_6385| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00099) 27 8.8
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 203 bits (496), Expect = 8e-53
Identities = 105/154 (68%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQMVKCDPR YMACCMLYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 225 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 284
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 285 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 342
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 343 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 376
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 203 bits (496), Expect = 8e-53
Identities = 105/154 (68%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQMVKCDPR YMACCMLYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 213 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 272
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 273 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 330
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 331 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 364
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 203 bits (496), Expect = 8e-53
Identities = 105/154 (68%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQMVKCDPR YMACCMLYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 86 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 145
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 146 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 203
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 204 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 237
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 202 bits (493), Expect = 2e-52
Identities = 104/154 (67%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQMVKCDPR YMACC+LYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 288 VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 348 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 202 bits (493), Expect = 2e-52
Identities = 104/154 (67%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQMVKCDPR YMACC+LYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 721 VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 780
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 781 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 838
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 839 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 872
Score = 195 bits (475), Expect = 3e-50
Identities = 101/149 (67%), Positives = 106/149 (71%), Gaps = 2/149 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQMVKCDPR YMACCMLYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 288 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 348 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLD--HKFDLMYAKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEE 133
HWYVGEGMEEGEFSEAREDLAALEKDYEE
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 202 bits (493), Expect = 2e-52
Identities = 104/154 (67%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQMVKCDPR YMACC+LYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 873 VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 932
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 933 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 990
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 991 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 1024
Score = 120 bits (290), Expect = 7e-28
Identities = 59/78 (75%), Positives = 61/78 (78%), Gaps = 2/78 (2%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQMVKCDPR YMACCMLYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 352 VAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 411
Query: 393 SNRFQG--RYQLPATHRG 346
F+ YQ P G
Sbjct: 412 PTGFKVGINYQPPTVVPG 429
Score = 64.1 bits (149), Expect = 8e-11
Identities = 25/26 (96%), Positives = 26/26 (100%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKV 321
WCPTGFKVGINYQPPTVVPGGDLAK+
Sbjct: 410 WCPTGFKVGINYQPPTVVPGGDLAKI 435
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 200 bits (487), Expect = 9e-52
Identities = 102/154 (66%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQMVKCDPR YMACC+LYRGDVVPK+VN++IATIKTKRTIQFVD
Sbjct: 288 VAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSSIATIKTKRTIQFVDWC 347
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 348 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 405
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 406 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 199 bits (485), Expect = 2e-51
Identities = 101/154 (65%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V+++TNACFEPANQMVKCDPR YMACC+LYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 253 VSDLTNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 312
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 313 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 370
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 371 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 404
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 194 bits (474), Expect = 3e-50
Identities = 100/149 (67%), Positives = 107/149 (71%), Gaps = 2/149 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VA+ITNACFEPANQMVKCDPR YMACC+LYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 86 VADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 145
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q S C + + +FDLMYAKRAFV
Sbjct: 146 PTGFKVGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARLN--HKFDLMYAKRAFV 203
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEE 133
HWYVGEGMEEGEFSEAREDLAALEKDYEE
Sbjct: 204 HWYVGEGMEEGEFSEAREDLAALEKDYEE 232
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 193 bits (471), Expect = 8e-50
Identities = 98/154 (63%), Positives = 110/154 (71%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V+++TNACFEPANQMVKCDPR YMACC+L+RGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 704 VSDLTNACFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWC 763
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 764 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 821
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEV ++S
Sbjct: 822 HWYVGEGMEEGEFSEAREDLAALEKDYEEVAVES 855
Score = 188 bits (459), Expect = 2e-48
Identities = 97/149 (65%), Positives = 105/149 (70%), Gaps = 2/149 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEIT +CFEPANQMVKCDPR YMACC+L+RGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 273 VAEITTSCFEPANQMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWC 332
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 333 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 390
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEE 133
HWYVGEGMEEGEFSEAREDLAALEKDYEE
Sbjct: 391 HWYVGEGMEEGEFSEAREDLAALEKDYEE 419
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 189 bits (460), Expect = 2e-48
Identities = 96/149 (64%), Positives = 106/149 (71%), Gaps = 2/149 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VA+ITN+CFEPANQMVKCDPR YMACC+LYRGDVVPK+VN+AIATIKTK+TIQFVD
Sbjct: 659 VADITNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKKTIQFVDWC 718
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 719 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD--HKFDLMYAKRAFV 776
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEE 133
HWYVGEGMEEGEFSEAREDLAALEKDYEE
Sbjct: 777 HWYVGEGMEEGEFSEAREDLAALEKDYEE 805
Score = 131 bits (316), Expect = 5e-31
Identities = 84/154 (54%), Positives = 90/154 (58%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITNACFEPANQM +VNAAIATIKTKRTIQFVD
Sbjct: 1092 VAEITNACFEPANQM------------------------DVNAAIATIKTKRTIQFVDWC 1127
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 1128 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH--KFDLMYAKRAFV 1185
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 1186 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 1219
Score = 110 bits (265), Expect = 7e-25
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH
Sbjct: 1126 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 1173
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 182 bits (442), Expect = 3e-46
Identities = 95/152 (62%), Positives = 103/152 (67%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITN+CFEPANQMVKCDPR YMACC+LYRGDVVPK+VNAAIATI+ KRT QF D
Sbjct: 213 VAEITNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIRPKRTFQFGDWC 272
Query: 393 SNRFQGRYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVHW 214
F+ Q T + +FDLMYAKRAFVHW
Sbjct: 273 PTGFKVGIN------------SQPPTVVPGGDLAKPIAEAWARLDHKFDLMYAKRAFVHW 320
Query: 213 YVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
YVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 321 YVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 352
Score = 67.7 bits (158), Expect = 7e-12
Identities = 34/48 (70%), Positives = 34/48 (70%)
Frame = -3
Query: 398 WCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
WCPTGFKVGIN QPPTVVPGGDLAK IAEAWARLDH
Sbjct: 271 WCPTGFKVGINSQPPTVVPGGDLAK------------PIAEAWARLDH 306
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 134 bits (324), Expect = 5e-32
Identities = 82/154 (53%), Positives = 94/154 (61%), Gaps = 2/154 (1%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEITN ++ ++++A C GDVV K+VNAAIATIKTKRTIQFVD
Sbjct: 278 VAEITNGILSNVIRVTA-----STWLAVCYS-EGDVVLKDVNAAIATIKTKRTIQFVDWC 331
Query: 393 SNRFQG--RYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFV 220
F+ YQ P G Q + C + +FDLMYAKRAFV
Sbjct: 332 PTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH--KFDLMYAKRAFV 389
Query: 219 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
HWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 390 HWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 423
Score = 113 bits (272), Expect = 1e-25
Identities = 57/90 (63%), Positives = 59/90 (65%)
Frame = -3
Query: 524 NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTWCPTGFKVGINYQPPTVV 345
N V TWLAVC + + K WCPTGFKVGINYQPPTVV
Sbjct: 288 NVIRVTASTWLAVCYSEGDVVLKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVV 347
Query: 344 PGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
PGGDLAKVQRAVCMLSNTTAIAEAWARLDH
Sbjct: 348 PGGDLAKVQRAVCMLSNTTAIAEAWARLDH 377
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 118 bits (283), Expect = 5e-27
Identities = 53/65 (81%), Positives = 57/65 (87%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VA+ITNACFEPANQMVKCDPR YMACC+LYRGDVVPK+VNAAIATIKTKRTIQFVD
Sbjct: 287 VADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWC 346
Query: 393 SNRFQ 379
F+
Sbjct: 347 PTGFK 351
Score = 33.1 bits (72), Expect = 0.18
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3
Query: 398 WCPTGFKVGINYQPP 354
WCPTGFKVGI ++ P
Sbjct: 345 WCPTGFKVGIRHKAP 359
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 109 bits (263), Expect = 1e-24
Identities = 49/65 (75%), Positives = 55/65 (84%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
VAEIT+ACFEP+NQMVKCDPR YMACC+LYRGDVVPK+VN+AIA IK KRTIQFVD
Sbjct: 419 VAEITSACFEPSNQMVKCDPRYGKYMACCLLYRGDVVPKDVNSAIAAIKMKRTIQFVDWC 478
Query: 393 SNRFQ 379
F+
Sbjct: 479 PTGFK 483
Score = 97.9 bits (233), Expect = 6e-21
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = -2
Query: 255 QFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
+FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DS
Sbjct: 546 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 591
Score = 93.5 bits (222), Expect = 1e-19
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -3
Query: 389 TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
+G +VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH
Sbjct: 501 SGTQVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 545
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 98.7 bits (235), Expect = 3e-21
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = -2
Query: 255 QFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
+FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 92 KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 137
Score = 81.8 bits (193), Expect = 4e-16
Identities = 36/41 (87%), Positives = 39/41 (95%)
Frame = -3
Query: 377 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDH 255
VGINYQ PT VPGGDLAKVQR+VCMLSNTTAIA+AWARL+H
Sbjct: 51 VGINYQQPTAVPGGDLAKVQRSVCMLSNTTAIADAWARLNH 91
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 252 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 118
+D YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 9 YDHDYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 53
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 76.2 bits (179), Expect = 2e-14
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T F+ N M CDPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 286 VPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L +T + + QF M+ ++AF+H
Sbjct: 346 PNNVKTAVCDIPP------RGLKMSATFIGNSTAIQELFKRISE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 76.2 bits (179), Expect = 2e-14
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T F+ N M CDPR Y+ ++RG + K V+ + ++ K + FV+ +
Sbjct: 286 VPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWI 345
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L +T + + QF M+ ++AF+H
Sbjct: 346 PNNVKTAVCDIPP------RGLKMSATFIGNSTAIQELFKRISE---QFTAMFRRKAFLH 396
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 397 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 72.1 bits (169), Expect = 3e-13
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 1/148 (0%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLV 394
V E+T F+ N M CDP Y+ ++RG + K ++ + ++ K + FV+ +
Sbjct: 231 VPELTQQMFDAKNMMAACDPLHGRYLTVAAMFRGRMSMKELDEQMLNVQNKNSSYFVEWI 290
Query: 393 SNRFQGRY-QLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVH 217
N + +P R L +T + + QF M+ ++AF+H
Sbjct: 291 PNNVKTAVCDIPP------RGLKMSATFIGNSTAIQELFKRISE---QFTAMFRRKAFLH 341
Query: 216 WYVGEGMEEGEFSEAREDLAALEKDYEE 133
WY GEGM+E EF+EA ++ L +Y++
Sbjct: 342 WYTGEGMDEMEFTEAESNMNDLVSEYQQ 369
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 72.1 bits (169), Expect = 3e-13
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRGDV 466
VA+ITN CF+P NQMVKCDPR YMACCMLYRGDV
Sbjct: 1199 VAQITNMCFDPNNQMVKCDPRHGKYMACCMLYRGDV 1234
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 65.7 bits (153), Expect = 3e-11
Identities = 40/157 (25%), Positives = 74/157 (47%)
Frame = -2
Query: 603 RKALP*TSFPVAEITNACFEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKT 424
R+ + + VA++T A F+ N ++ C+P++ Y+ +YRG + K V +A +
Sbjct: 181 RECVSYRALTVADLTQAIFDNKNLLIACNPKRGKYLTYAAMYRGLMSMKEVEDQMAFAQD 240
Query: 423 KRTIQFVDLVSNRFQGRYQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDL 244
+ + FVD + N G+ A + ++C + + + L
Sbjct: 241 RYSSLFVDWIPNN--GKV---AVCDVPPHDMKMSASCISSNTAIQELFKRIRL---HYKL 292
Query: 243 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 133
M+ +RAF+HWY EGM+ +F EA D+ L Y++
Sbjct: 293 MFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQQ 329
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 50.8 bits (116), Expect = 8e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -2
Query: 255 QFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 133
QF M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 149 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 189
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 50.8 bits (116), Expect = 8e-07
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -2
Query: 255 QFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 133
QF M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 211 QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIAEYQQ 251
Score = 35.5 bits (78), Expect = 0.033
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 573 VAEITNACFEPANQMVKCDPRQASYMACCMLYRG 472
V E+T F+ N M CDPR Y+ ++RG
Sbjct: 30 VEELTQQMFDARNMMTACDPRHGRYLTVAAIFRG 63
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 41.1 bits (92), Expect = 7e-04
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Frame = -2
Query: 549 FEPANQMVKCDPRQASYMACCMLYRGDVVPKNVNAAIATIKTKRTIQFVDLVSNRFQ-GR 373
F +Q++K DP+ Y+AC ++ RG+V ++ I +K +++F+ ++ G
Sbjct: 343 FSKDHQLIKADPKHNLYLACALILRGNVEVSDIRRNIERLKP--SLKFIHWNQEGWKTGL 400
Query: 372 YQLPATHRGARRRLGQGSTCXXXXXXXXXXXRSLGSP*PQFDLMYAKRAFVHWYVG-EGM 196
+P + ++C +F +Y ++A VH Y +G+
Sbjct: 401 CSVPPVGQPYSLLTLANNSCIKNTFVELK---------DRFMKLYKRKAHVHHYTHVDGL 451
Query: 195 EEGEFSEAREDLAALEKDY 139
E G+F + E L+ L ++Y
Sbjct: 452 EVGQFDDGLESLSWLIQEY 470
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2
Query: 255 QFDLMYAKRAFVHWYVGEGMEEGEFSEARED 163
QF M+ +RAF+HWY EGM+ EF+E + +
Sbjct: 203 QFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 31.1 bits (67), Expect = 0.72
Identities = 22/79 (27%), Positives = 28/79 (35%)
Frame = -3
Query: 572 SPRSQTHASSPPTRW*NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNSSTWC 393
SP S + PT ++TP + L T T P T SL +KP T
Sbjct: 117 SPNSSSSTGQTPTEKTDSTPKSSGSTLPTSSTPATQNP---TDSSLSTKPPTKKTGETQS 173
Query: 392 PTGFKVGINYQPPTVVPGG 336
PT + T P G
Sbjct: 174 PTENSISTEESATTPTPSG 192
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.1 bits (67), Expect = 0.72
Identities = 39/168 (23%), Positives = 55/168 (32%), Gaps = 1/168 (0%)
Frame = -3
Query: 584 PAFPS-PRSQTHASSPPTRW*NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSN 408
P+ PS PR+ + S+P T +TP +T S P + PS PS P S
Sbjct: 24 PSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTPST 83
Query: 407 SSTWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHSSTSCTPSV 228
ST + P + +T + A + ST TPS
Sbjct: 84 PSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPST 143
Query: 227 LSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKST 84
S T + P+ PS T + TP+ ST
Sbjct: 144 PSTPSTPSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPST 191
Score = 30.7 bits (66), Expect = 0.95
Identities = 34/129 (26%), Positives = 50/129 (38%), Gaps = 4/129 (3%)
Frame = -3
Query: 584 PAFPS-PRSQTHASSPPTRW*NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSN 408
P+ PS P +++ S+P T +TP T T S P + PS PS PS+ +
Sbjct: 640 PSTPSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPSMPNT 699
Query: 407 SST-WCPTGFKVGINYQPPTV--VPGGDLAKVQRAVCMLSNTTAIAEAWARLDHSSTSCT 237
ST P+ I P+ P + + +T + + ST T
Sbjct: 700 PSTPSTPSTPSTPITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPSTRSTPSTPSTPST 759
Query: 236 PSVLSCTGT 210
PS LS T
Sbjct: 760 PSTLSMPST 768
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -3
Query: 584 PAFPSPRSQTHA-SSPPTRW*NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSN 408
P PS S S+P TR +TP T + S P + PS PS PS LS
Sbjct: 180 PITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLST 239
Query: 407 SST 399
T
Sbjct: 240 PIT 242
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -3
Query: 584 PAFPSPRSQTHA-SSPPTRW*NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSN 408
P PS S S+P TR +TP T + S P + PS PS PS LS
Sbjct: 730 PITPSTLSTPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPSMPNTPSTPSTPSTPSTLST 789
Query: 407 SST 399
T
Sbjct: 790 PIT 792
Score = 28.3 bits (60), Expect = 5.1
Identities = 41/169 (24%), Positives = 57/169 (33%), Gaps = 2/169 (1%)
Frame = -3
Query: 584 PAFPS-PRSQTHASSPPTRW*NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSN 408
P+ PS PR+ + S+P T +TP +T S P + PS PS PS S
Sbjct: 389 PSTPSTPRTPSTPSTPCTPSTPSTPSTPITPRTPSTPCTHSTPGTPSTPSTPSTPSTPST 448
Query: 407 SS-TWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHSSTSCTPS 231
S T P+ P+ P + +T + + ST TPS
Sbjct: 449 PSLTHTPSTPSTPSTPSTPS-TPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPS 507
Query: 230 VLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKST 84
GT + P PS T + TP + ST
Sbjct: 508 APGTPGTPSTPSTPSAPGTPSTPSTPSTPSTPSTPSTPSTPSMPSTPST 556
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = -3
Query: 584 PAFPSPRSQTHASSPPTRW*NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNS 405
P+ PS S S P+ +TP T C S P + PS PS PS S
Sbjct: 243 PSTPSTPSTPSTPSMPST--PSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTP 300
Query: 404 ST 399
ST
Sbjct: 301 ST 302
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = -3
Query: 584 PAFPSPRSQTHASSPPTRW*NATPVRQVTWLAVCCTVVTSYPRM*TRPSLPSKPSVLSNS 405
P+ PS S S P+ +TP T C S P + PS PS PS S
Sbjct: 793 PSTPSTPSTPSTPSMPST--PSTPSTPSTPSTPCTPNTPSTPSTPSMPSTPSTPSTPSTP 850
Query: 404 ST 399
ST
Sbjct: 851 ST 852
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +3
Query: 105 PRLQRSPCRLLRNPSRGQPGPHGLR---RTLPPPYPHRRTSARKH 230
PR QR +P+ P L R+ PPPYP RTS H
Sbjct: 737 PRQQRMMTTTAHSPTAQSPSADSLGSSVRSPPPPYPGSRTSGNPH 781
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +3
Query: 153 GQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTVVKASP 272
G PGP GLR + PP T +W + G +K P
Sbjct: 758 GNPGPPGLRGDVGPPGEQGPTGVPGESWTSGGVGQIKQGP 797
>SB_40804| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = -3
Query: 449 TRPSLPSKPSVLSNSSTWCPTGFKVGINYQPPTVVPG--GDLAKVQRAVCML--SNTTAI 282
+RP+ P LS SS CP G + + P +V G +K C+L N +
Sbjct: 159 SRPTRPPSLETLSRSSVMCPIGSQTKKGFSPKNLVSNIEGARSKSAELSCILGEENINIL 218
Query: 281 AEAWARLDHSSTSC 240
L+ SC
Sbjct: 219 LATETHLNPQVNSC 232
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 243 MYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDY 139
M+A RA+VH Y+ G+ E F ++ L + K+Y
Sbjct: 437 MFASRAYVHQYLRFGISEDAFVDSFACLEQVVKNY 471
>SB_50741| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 28.7 bits (61), Expect = 3.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 354 GWLVVDTDLETGWTPS 401
GW VD D+E GW P+
Sbjct: 38 GWCFVDVDVELGWVPA 53
>SB_37815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -3
Query: 440 SLPSKPSVLSNSSTWCPTGF-KVGINYQPPTVVPGGDL 330
++P P VLS S WCP K + Y P V PGG L
Sbjct: 72 AIPGVP-VLSESHPWCPCVVRKPPLLYWYPYVYPGGAL 108
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 66 KIFHWLSTLRLPHP-RLQRSPCRLLRNPSRGQPGPH 170
K+FH + L P RL+R +++R + G P PH
Sbjct: 154 KLFHAVVVLEFPKSQRLERGQSQVIRCSAEGYPTPH 189
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 144 PSRGQPGPHGLRRTLPPPYPHRRTSA 221
PSRG P P R + PPP P R +A
Sbjct: 300 PSRGAPPPPPSRGSAPPPPPARMGTA 325
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 96 LPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPP--PYPHRRTSARK-HAWRT*GRTVVKA 266
+P+P +Q+ P + P++ +P P R P P P R +K HA VK
Sbjct: 527 IPNPMMQQQPLQYGPAPNKYRPAPQPYRPAPEPYRPAPFRPAQVKKVHAKTASVHAKVKT 586
Query: 267 SPS 275
P+
Sbjct: 587 RPA 589
>SB_56859| Best HMM Match : rve (HMM E-Value=4.8e-35)
Length = 1671
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -3
Query: 188 ESSPKPVRTWLPSRRITKKSAWTPLKARVREPKSTKPMK 72
+ SPKP + WL +++ KK+ P K +V++ K KP++
Sbjct: 1630 KDSPKPQKVWLKNKKKGKKA--KPNKQQVKK-KPAKPVQ 1665
>SB_50744| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 321 NLGQVASGHHGGWLVVDTDLETGWTPS 401
N+ V + GW VD D E GW P+
Sbjct: 158 NVVDVIQKNEHGWWFVDLDGELGWVPA 184
>SB_6385| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00099)
Length = 437
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 231 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 133
RAFV ++ EG EE D A +E+D EE
Sbjct: 70 RAFVTRFMAEGCEEKTLEMMSRDDAFIEEDVEE 102
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,357,817
Number of Sequences: 59808
Number of extensions: 463187
Number of successful extensions: 1696
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1625
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -