Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1169
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   5.0  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    22   5.0  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   5.0  
AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...    21   6.7  
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...    21   6.7  
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...    21   6.7  

>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 616 CYLIQLEMSLHNLMR 572
           CY++  E  LHNL R
Sbjct: 72  CYMLFREPQLHNLCR 86


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 616 CYLIQLEMSLHNLMR 572
           CY++  E  LHNL R
Sbjct: 72  CYMLFREPQLHNLCR 86


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 616 CYLIQLEMSLHNLMR 572
           CY++  E  LHNL R
Sbjct: 72  CYMLFREPQLHNLCR 86


>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 54  RTLSDYNIQKESTLHLVLRLR 74


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 54  RTLSDYNIQKESTLHLVLRLR 74



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 130 RTLSDYNIQKESTLHLVLRLR 150



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 206 RTLSDYNIQKESTLHLVLRLR 226



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 282 RTLSDYNIQKESTLHLVLRLR 302



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 358 RTLSDYNIQKESTLHLVLRLR 378



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 434 RTLSDYNIQKESTLHLVLRLR 454



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 510 RTLSDYNIQKESTLHLVLRLR 530



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 586 RTLSDYNIQKESTLHLVLRLR 606



 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 662 RTLSDYNIQKESTLHLVLRLR 682


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 628 RTSFCYLIQLEMSLHNLMRIR 566
           RT   Y IQ E +LH ++R+R
Sbjct: 26  RTLSDYNIQKESTLHLVLRLR 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,293
Number of Sequences: 336
Number of extensions: 2597
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)