Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1169
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   4.8  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   6.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 333 RGDSVASLVLDTHGEDVQ 280
           RG+++ S+V+D  GED +
Sbjct: 262 RGNAIPSMVVDRRGEDAR 279


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +2

Query: 122 NLIETLDDLTKDPLSTDCFFSLLPTPSVPSRSHE 223
           N    + DLT+ P+ T   F LL  P      HE
Sbjct: 367 NTASVMGDLTEVPVPTRFIFILLGPPGSHGSFHE 400


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +2

Query: 74  FGLVIILNLSDKLFDGNLIETLDDLTKDPLS 166
           F  +++LN   K+++  L+  ++D+ +DP S
Sbjct: 496 FRPILLLNNPGKVYERLLLSRINDVIEDPES 526


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,741
Number of Sequences: 2352
Number of extensions: 10261
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)