Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0038
(337 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96; Eukary... 198 3e-50
UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein... 173 9e-43
UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=... 144 3e-34
UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;... 131 3e-30
UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92; Euka... 128 3e-29
UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, wh... 117 5e-26
UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S riboso... 111 2e-24
UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2; ... 111 4e-24
UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1; Os... 105 3e-22
UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Or... 100 6e-21
UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa... 100 1e-20
UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17; Archa... 95 3e-19
UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lambl... 94 5e-19
UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14; Archa... 89 2e-17
UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2; T... 88 4e-17
UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole gen... 85 3e-16
UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga ... 84 7e-16
UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1; Sulfol... 83 2e-15
UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum... 80 8e-15
UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1; Encepha... 77 8e-14
UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1; Nanoar... 72 3e-12
UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillar... 71 4e-12
UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera... 68 4e-11
UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9; Euryar... 65 3e-10
UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum... 60 7e-09
UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus Nit... 56 2e-07
UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2; Thermo... 54 5e-07
UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6; Euryar... 53 1e-06
UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n... 51 4e-06
UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environment... 43 0.001
UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S riboso... 42 0.002
UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 42 0.003
UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25; Bacter... 38 0.059
UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18; Bacter... 37 0.10
UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11; Bacter... 34 0.55
UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10; Bacter... 34 0.72
UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1; ... 33 0.95
UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61; Bacter... 33 0.95
UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60; Bacter... 33 1.3
UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q22V20 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24; ... 32 2.2
UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1; Scene... 32 2.9
UniRef50_P60628 Cluster: 50S ribosomal protein L24; n=17; Coryne... 32 2.9
UniRef50_Q5QXW9 Cluster: 50S ribosomal protein L24; n=9; Bacteri... 32 2.9
UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;... 31 3.8
UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmen... 31 3.8
UniRef50_Q8A5N4 Cluster: Putative uncharacterized protein; n=1; ... 31 5.1
UniRef50_Q2IJ78 Cluster: 50S ribosomal protein L24; n=2; Anaerom... 31 5.1
UniRef50_Q8YLR0 Cluster: Alr5236 protein; n=1; Nostoc sp. PCC 71... 31 6.7
UniRef50_Q05FN1 Cluster: Putative alanyl-tRNA synthetase; n=1; C... 31 6.7
UniRef50_Q4Z6T0 Cluster: Putative uncharacterized protein; n=2; ... 31 6.7
UniRef50_Q5UNZ4 Cluster: Uncharacterized protein R744; n=1; Acan... 31 6.7
UniRef50_Q0EW47 Cluster: Ribosomal protein L24; n=1; Mariprofund... 30 8.9
UniRef50_A6CIH2 Cluster: Putative uncharacterized protein; n=1; ... 30 8.9
UniRef50_Q8ILK9 Cluster: DNA-directed DNA polymerase, putative; ... 30 8.9
UniRef50_Q7RQ89 Cluster: C2 domain, putative; n=9; Plasmodium (V... 30 8.9
UniRef50_Q16LQ3 Cluster: Prominin (Prom) protein; n=3; Culicidae... 30 8.9
UniRef50_Q67JV4 Cluster: 50S ribosomal protein L24; n=5; Bacteri... 30 8.9
>UniRef50_P61254 Cluster: 60S ribosomal protein L26; n=96;
Eukaryota|Rep: 60S ribosomal protein L26 - Homo sapiens
(Human)
Length = 145
Score = 198 bits (482), Expect = 3e-50
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
MKFN VTS R KNRKRHF+APSHIRR +MSSPLSKELRQK+NV+SMPIRKDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
HYKGQQ+GKV+QVYRKK+V+YIER+QREKANG T +VGIHPSK VI +LK++
Sbjct: 61 HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLD 112
>UniRef50_UPI0000D8B882 Cluster: similar to 60S ribosomal protein
L26 (Silica-induced gene 20 protein) (SIG-20)
(LOC668913), mRNA; n=2; Eutheria|Rep: similar to 60S
ribosomal protein L26 (Silica-induced gene 20 protein)
(SIG-20) (LOC668913), mRNA - Mus musculus
Length = 139
Score = 173 bits (420), Expect = 9e-43
Identities = 79/111 (71%), Positives = 95/111 (85%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
MKFN VTS R K HF+APSHI R +MSSPLSKELRQK+NV+SMP +KDDEVQVVRG
Sbjct: 1 MKFNPFVTSDRSMKHKWHFNAPSHILRKIMSSPLSKELRQKYNVQSMPTQKDDEVQVVRG 60
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKM 334
HY+GQQ+GKV+QVYRKK+V+YI++++REKANG T VGIHPSK VI +LK+
Sbjct: 61 HYEGQQIGKVVQVYRKKYVIYIKQVEREKANGTTVRVGIHPSKVVITRLKL 111
>UniRef50_A5KBD9 Cluster: 60S ribosomal protein L26, putative; n=9;
Eukaryota|Rep: 60S ribosomal protein L26, putative -
Plasmodium vivax
Length = 156
Score = 144 bits (350), Expect = 3e-34
Identities = 62/112 (55%), Positives = 91/112 (81%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
MKFNKQ++S+RRK RK HF+AP+ +RR +MSS LSKELR K+ +++P+RKDDEV + RG
Sbjct: 30 MKFNKQISSARRKMRKAHFTAPAGLRRKIMSSKLSKELRLKYKTRALPVRKDDEVLICRG 89
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
H G++ GKV+++ RK+F +Y+ER+ REKANG + ++GIHPS ++ KLK++
Sbjct: 90 HNHGRE-GKVVKINRKRFKIYVERVTREKANGESTFIGIHPSNVILTKLKID 140
>UniRef50_A2QXI7 Cluster: Contig An11c0300, complete genome; n=2;
Trichocomaceae|Rep: Contig An11c0300, complete genome -
Aspergillus niger
Length = 134
Score = 131 bits (317), Expect = 3e-30
Identities = 62/109 (56%), Positives = 83/109 (76%)
Frame = +2
Query: 11 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 190
N + SSRRK+R HF+APS RRV++S+PLS ELR K+NV+SMPIRKDDEV VVRG K
Sbjct: 5 NSSLASSRRKSRAAHFNAPSSERRVILSAPLSSELRAKYNVRSMPIRKDDEVMVVRGSNK 64
Query: 191 GQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
G++ GKV VYR K+ +++ERI R+K+NG + + +HPS VI KL ++
Sbjct: 65 GRE-GKVTSVYRLKWAIHVERISRDKSNGQSVPIPLHPSNVVIKKLHLD 112
>UniRef50_P05743 Cluster: 60S ribosomal protein L26-A; n=92;
Eukaryota|Rep: 60S ribosomal protein L26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 127
Score = 128 bits (308), Expect = 3e-29
Identities = 60/111 (54%), Positives = 84/111 (75%)
Frame = +2
Query: 5 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 184
K + V+S RRK RK +F+APS RRVL+S+PLSKELR ++ +K++PIR+DDEV VVRG
Sbjct: 3 KQSLDVSSDRRKARKAYFTAPSSQRRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGS 62
Query: 185 YKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
KGQ+ GK+ VYR KF V ++++ +EK NGA+ + +HPSK VI KL ++
Sbjct: 63 KKGQE-GKISSVYRLKFAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLD 112
>UniRef50_A0BIZ3 Cluster: Chromosome undetermined scaffold_11, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_11,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 117 bits (282), Expect = 5e-26
Identities = 56/112 (50%), Positives = 81/112 (72%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
MK + +V+S RRK R+ APS++R LMS+ LSK+LR+K+NV+++P+RKDDEV VVRG
Sbjct: 1 MKTHVEVSSQRRKGRRAQLGAPSNLRYKLMSAHLSKDLRKKYNVRALPVRKDDEVTVVRG 60
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
+KG + GKV VYRK++ + IE++ R KANG + I S+C+I K +N
Sbjct: 61 THKGTK-GKVSSVYRKRWTIQIEKLTRTKANGMPYQIPIRASQCIITKPYLN 111
>UniRef50_UPI0000DD790D Cluster: PREDICTED: similar to 60S ribosomal
protein L26 (Silica-induced gene 20 protein) (SIG-20);
n=2; Homo/Pan/Gorilla group|Rep: PREDICTED: similar to
60S ribosomal protein L26 (Silica-induced gene 20
protein) (SIG-20) - Homo sapiens
Length = 127
Score = 111 bits (268), Expect = 2e-24
Identities = 52/77 (67%), Positives = 64/77 (83%), Gaps = 2/77 (2%)
Frame = +2
Query: 113 LRQKFNVKSMPIRKDDEVQVVR--GHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATA 286
L NV+SMP RKD+EVQVVR GHYKGQQ+G V+QVYRKK+V+YIE +Q+EKANG T
Sbjct: 18 LNAHINVQSMPNRKDNEVQVVRVRGHYKGQQIGTVVQVYRKKYVIYIEWVQQEKANGTTV 77
Query: 287 YVGIHPSKCVIVKLKMN 337
+VGIHPSK VI +LK++
Sbjct: 78 HVGIHPSKAVITRLKLD 94
>UniRef50_UPI0000499C5A Cluster: 60S ribosomal protein L26; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L26 - Entamoeba histolytica HM-1:IMSS
Length = 213
Score = 111 bits (266), Expect = 4e-24
Identities = 55/112 (49%), Positives = 79/112 (70%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
MKFN +V+S+ K RK ++AP+ R +LMS+ LSKELR+K+NV ++PI KDDEV++++G
Sbjct: 1 MKFNCKVSSNPSKARKALYTAPASQRAILMSARLSKELREKYNVIAIPIHKDDEVKIIKG 60
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
H K GKV V R K+V+ I+++ + KANG T V I PS +I KL +N
Sbjct: 61 HQK--VAGKVTAVRRSKYVINIDKLTKTKANGQTVPVAIRPSNVIITKLFLN 110
>UniRef50_Q00Y51 Cluster: Putative L24 ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative L24 ribosomal protein -
Ostreococcus tauri
Length = 154
Score = 105 bits (251), Expect = 3e-22
Identities = 51/92 (55%), Positives = 69/92 (75%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
MK++ VTSSRRK RK HF+APS RR LMS+ LS EL+ + ++PIR +DEV+V RG
Sbjct: 20 MKYSTAVTSSRRKTRKAHFTAPSSERRKLMSAALSAELKAQHGANAVPIRVNDEVRVTRG 79
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANG 277
+K ++ GKV+QVYRKK+V++I I R+K NG
Sbjct: 80 SFKNRE-GKVVQVYRKKWVIHIANITRDKVNG 110
>UniRef50_Q5ZDH6 Cluster: Putative ribosomal protein L26; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein L26 - Oryza sativa subsp. japonica (Rice)
Length = 129
Score = 100 bits (240), Expect = 6e-21
Identities = 48/64 (75%), Positives = 55/64 (85%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
MK N +VTSSRRK RK HF+APS +RRVLMS+ LS ELR K+NV+S+PIRKDDEVQVVRG
Sbjct: 1 MKRNPRVTSSRRKCRKAHFTAPSSVRRVLMSAALSSELRHKYNVRSIPIRKDDEVQVVRG 60
Query: 182 HYKG 193
YKG
Sbjct: 61 SYKG 64
>UniRef50_Q0IUK5 Cluster: Os11g0151300 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0151300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 99.5 bits (237), Expect = 1e-20
Identities = 48/89 (53%), Positives = 69/89 (77%)
Frame = +2
Query: 71 HIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIE 250
H+RR L +P ++++ + P+RKDDEVQVVRG YKG++ GKV+QVYR+++V+++E
Sbjct: 40 HVRRALHRAP--PQVQRPLH----PVRKDDEVQVVRGSYKGRE-GKVVQVYRRRWVIHVE 92
Query: 251 RIQREKANGATAYVGIHPSKCVIVKLKMN 337
RI REK NG+T VGIHPSK V+ KLK++
Sbjct: 93 RITREKVNGSTVNVGIHPSKVVVTKLKLD 121
>UniRef50_Q8TW19 Cluster: 50S ribosomal protein L24P; n=17;
Archaea|Rep: 50S ribosomal protein L24P - Methanopyrus
kandleri
Length = 149
Score = 95.1 bits (226), Expect = 3e-19
Identities = 45/101 (44%), Positives = 69/101 (68%)
Frame = +2
Query: 23 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 202
+S RK RK F+AP H R+ LMS+ L ELR+KFN +S+P+R+ D V+++RG +KG +
Sbjct: 6 SSQPRKQRKAFFNAPLHKRQKLMSATLHPELRKKFNRRSLPVRRGDMVRIMRGDFKGHE- 64
Query: 203 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVK 325
G+V++V K+ +Y+E E+ANG Y IHPS +I++
Sbjct: 65 GEVVEVDLKRLRIYVEGATIERANGEKVYYPIHPSNVMIIE 105
>UniRef50_Q7R3B5 Cluster: GLP_111_22147_22554; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_111_22147_22554 - Giardia lamblia
ATCC 50803
Length = 135
Score = 94.3 bits (224), Expect = 5e-19
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
MK N VT+SRRK RK +F+A + R +MSS LSKELR + +K+MPIR+ D V++ G
Sbjct: 1 MKLNSAVTASRRKCRKAYFTANAETRAKMMSSRLSKELRAEHKIKTMPIRRGDIVEIFTG 60
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV--GIHPSKCVIVKLKMN 337
+KG GKV++V R+ + + +E I ++ N V IHPS C+I +L MN
Sbjct: 61 GHKG--TGKVVEVRRRDYKICVEGINQKARNPEAKPVPYPIHPSNCIIKELYMN 112
>UniRef50_P54038 Cluster: 50S ribosomal protein L24P; n=14;
Archaea|Rep: 50S ribosomal protein L24P - Methanococcus
jannaschii
Length = 120
Score = 88.6 bits (210), Expect = 2e-17
Identities = 44/109 (40%), Positives = 71/109 (65%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
M F K + RK RK F+AP H+RR +MS+ LSKEL++K ++P+RK D V+++RG
Sbjct: 1 MAFTK--SKQPRKQRKALFNAPLHLRRKVMSAMLSKELKEKLGKNAIPVRKGDVVRIMRG 58
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 328
+KG + G+V++V K++ +Y+E ++ +G IHPS +I+KL
Sbjct: 59 DFKGLE-GEVIKVDLKRYRIYVEGANNKRQDGREVPYPIHPSNVMIIKL 106
>UniRef50_A2DCS2 Cluster: Ribosomal protein L24, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24,
putative - Trichomonas vaginalis G3
Length = 138
Score = 87.8 bits (208), Expect = 4e-17
Identities = 43/112 (38%), Positives = 68/112 (60%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
+K N ++S +K RK F+A + +S+ L+KE + VK +PIR+DDEV + G
Sbjct: 2 VKTNPFLSSQAKKTRKAFFNATKDDKHRQLSAKLNKEQAETHGVKQLPIRRDDEVSINSG 61
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
+ G++ GKV+ V + + ++ REK NG T +V +HPS C+I KLKM+
Sbjct: 62 KFAGRE-GKVIAVKLSENRIVVDSFTREKLNGQTVHVSVHPSNCLITKLKMD 112
>UniRef50_A7QPA2 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 119
Score = 85.0 bits (201), Expect = 3e-16
Identities = 40/62 (64%), Positives = 53/62 (85%)
Frame = +2
Query: 83 VLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQR 262
+LMS+PLS LR K+NV+SMPIRKDDEVQVVRG +KG++ GKV+QVY +K V++++RI
Sbjct: 46 LLMSAPLSTNLRSKYNVRSMPIRKDDEVQVVRGTFKGRE-GKVVQVYCQKRVIHVKRISH 104
Query: 263 EK 268
EK
Sbjct: 105 EK 106
>UniRef50_A3H985 Cluster: Ribosomal protein L24; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L24 -
Caldivirga maquilingensis IC-167
Length = 143
Score = 83.8 bits (198), Expect = 7e-16
Identities = 41/102 (40%), Positives = 65/102 (63%)
Frame = +2
Query: 23 TSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQV 202
+S RK K AP H RR L+++PLSK+L+++ ++ +P+R D V ++RG +KG +
Sbjct: 7 SSQPRKQHKALTKAPWHARRRLLTAPLSKDLQRQLGIRRIPVRVGDTVLILRGDFKGTR- 65
Query: 203 GKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 328
GKV +V K+ +Y++ +K +G Y IHPSK VIV+L
Sbjct: 66 GKVTRVDYKRVRIYVDSASFKKPSGEAVYYPIHPSKVVIVEL 107
>UniRef50_O05633 Cluster: 50S ribosomal protein L24P; n=1;
Sulfolobus acidocaldarius|Rep: 50S ribosomal protein
L24P - Sulfolobus acidocaldarius
Length = 134
Score = 82.6 bits (195), Expect = 2e-15
Identities = 40/103 (38%), Positives = 69/103 (66%)
Frame = +2
Query: 20 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQ 199
++S K RK ++ P+H+R L+++ LS++L +++ +K + IRK D V+++RG G +
Sbjct: 2 ISSKPSKQRKLVYNLPNHLRYKLLTARLSEDLEKQYGIKRISIRKGDSVKLMRGSQVGYE 61
Query: 200 VGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 328
GKV++V RK+ V IE + ++KA+G YV +H SK +I KL
Sbjct: 62 -GKVVEVDRKRGRVAIEGLTKKKADGTPVYVWVHASKVIITKL 103
>UniRef50_A1RWS4 Cluster: Ribosomal protein L24; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L24 - Thermofilum
pendens (strain Hrk 5)
Length = 131
Score = 80.2 bits (189), Expect = 8e-15
Identities = 45/109 (41%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Frame = +2
Query: 14 KQVTSSRRKNRKRH-FSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYK 190
K +S K RKR + AP HIR + +PLS EL+QK +K + +RK D V +VRG +K
Sbjct: 3 KGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFK 62
Query: 191 GQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
G + GKV V KK +++E KA+G IHPSK V+ +L ++
Sbjct: 63 GHE-GKVTSVDVKKGRIHVEGATLRKADGTEVPFPIHPSKVVVTELDLS 110
>UniRef50_Q8SRE6 Cluster: 60S RIBOSOMAL PROTEIN L26; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L26
- Encephalitozoon cuniculi
Length = 143
Score = 77.0 bits (181), Expect = 8e-14
Identities = 41/104 (39%), Positives = 62/104 (59%)
Frame = +2
Query: 14 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 193
KQ TSSRRK RK HF+ +R+ S+ LS+ELR+++ ++ P+R D V V G + G
Sbjct: 6 KQKTSSRRKQRKAHFACNDGEKRIRSSARLSRELRKEYGFRTFPLRTGDTVVVKGGKFDG 65
Query: 194 QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVK 325
++ G + ++ + + VYIE K +G A V I+PSK I K
Sbjct: 66 KE-GVISKINYRDYKVYIEGCFVTKNDGTNALVPIYPSKLTITK 108
>UniRef50_P60663 Cluster: 50S ribosomal protein L24P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L24P -
Nanoarchaeum equitans
Length = 140
Score = 71.7 bits (168), Expect = 3e-12
Identities = 39/101 (38%), Positives = 64/101 (63%)
Frame = +2
Query: 35 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 214
RK RK +AP H RR +M SPLSKELR+K ++++PI+ D V+V RG+++G++ G+V+
Sbjct: 23 RKQRKYIINAPLHRRRKMMRSPLSKELREKLGIRNVPIKVGDVVRVERGNFRGKE-GQVI 81
Query: 215 QVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMN 337
+ K + VY+ + ++ HPSK I+KL ++
Sbjct: 82 DIDPKYYRVYLS-LDTDR------QYPFHPSKLTIIKLDLS 115
>UniRef50_Q98RW9 Cluster: 60S ribosomal protein L26; n=1; Guillardia
theta|Rep: 60S ribosomal protein L26 - Guillardia theta
(Cryptomonas phi)
Length = 108
Score = 71.3 bits (167), Expect = 4e-12
Identities = 37/109 (33%), Positives = 65/109 (59%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 181
MK+ VT SRRKNRKR F ++ + LSKE+++ K++ ++K+ E++V RG
Sbjct: 1 MKYKHHVTCSRRKNRKRCFLNLKRKNSNIIKTNLSKEMQKYHKKKTLILKKNYEIKVKRG 60
Query: 182 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 328
+KG + GKV+Q+ ++ ++++ I R K +V + PS I+K+
Sbjct: 61 DFKG-KTGKVIQIKPEQQKIFVDNIFRNKFEKTNIFVPLKPSNIQIIKI 108
>UniRef50_A4YCX7 Cluster: KOW domain protein; n=1; Metallosphaera
sedula DSM 5348|Rep: KOW domain protein - Metallosphaera
sedula DSM 5348
Length = 111
Score = 68.1 bits (159), Expect = 4e-11
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = +2
Query: 95 SPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKAN 274
+PLS EL +++ +K + IRKDD V+V+RG G + GKV QV+ + + IE + R+KA+
Sbjct: 8 APLSDELAKEYGMKRIGIRKDDTVRVMRGDNYGFE-GKVTQVFPESGRIAIEGLTRKKAD 66
Query: 275 GATAYVGIHPSKCVIVKLKMN 337
G Y+ IH SK I KL N
Sbjct: 67 GTPVYIKIHASKVEITKLNTN 87
>UniRef50_Q8PV39 Cluster: 50S ribosomal protein L24P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 122
Score = 65.3 bits (152), Expect = 3e-10
Identities = 34/107 (31%), Positives = 59/107 (55%)
Frame = +2
Query: 14 KQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKG 193
+ V+ RK RK ++AP HIR+ M + LS+ L +++ +S + D V+++RG +KG
Sbjct: 6 EMVSKQPRKQRKARYTAPLHIRQKFMGARLSEALAKQYGTRSAAVITGDTVKIMRGDFKG 65
Query: 194 QQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKM 334
+ GKV V + ++ + K +G I+PS +I KL+M
Sbjct: 66 TE-GKVQSVSLMDGTIAVDGVISTKVDGTEVPRPINPSNVMITKLEM 111
>UniRef50_A0RVY4 Cluster: Ribosomal protein L24; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L24 - Cenarchaeum
symbiosum
Length = 167
Score = 60.5 bits (140), Expect = 7e-09
Identities = 39/101 (38%), Positives = 57/101 (56%)
Frame = +2
Query: 26 SSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVG 205
+++ +NR+ + A + R + + SPLSKELR K+ +S+ + + D V VVRG YK G
Sbjct: 3 ATKMRNRQI-YQASTRTRSMQVGSPLSKELRAKYGKRSVRVVEGDTVSVVRGEYKDID-G 60
Query: 206 KVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 328
KV V + V IE I++EK G V I SK V+ L
Sbjct: 61 KVSHVDTESGSVAIEGIKKEKGKGDKFDVLIRASKVVVTGL 101
>UniRef50_A7DSY3 Cluster: KOW domain protein; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: KOW domain protein -
Candidatus Nitrosopumilus maritimus SCM1
Length = 168
Score = 56.0 bits (129), Expect = 2e-07
Identities = 31/98 (31%), Positives = 52/98 (53%)
Frame = +2
Query: 35 RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVM 214
+ K + A + + S LSK+L++K+ +S+ + + D V ++RG +KG GKV
Sbjct: 5 KMRNKMIYRASYQTKSKQLGSALSKDLQKKYGKRSVRVNEGDSVTILRGEFKGVD-GKVA 63
Query: 215 QVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKL 328
+V K V IE +++EK G V IH S ++ L
Sbjct: 64 EVSTAKSSVAIEGVKKEKTKGDKFDVFIHTSNLLVTSL 101
>UniRef50_Q97BW5 Cluster: 50S ribosomal protein L24P; n=2;
Thermoplasma|Rep: 50S ribosomal protein L24P -
Thermoplasma volcanium
Length = 145
Score = 54.4 bits (125), Expect = 5e-07
Identities = 32/79 (40%), Positives = 45/79 (56%)
Frame = +2
Query: 101 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 280
LSK+LR+K+ ++S PI K D V+VV G KG+ GKV +V +V +E I K +G
Sbjct: 9 LSKDLRKKYGIRSFPIVKGDVVKVVSGARKGEG-GKVAEVDHHSGLVIVEGITIAKIDGK 67
Query: 281 TAYVGIHPSKCVIVKLKMN 337
GI P K I L ++
Sbjct: 68 QKGFGISPEKLQITHLDLS 86
>UniRef50_P10972 Cluster: 50S ribosomal protein L24P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L24P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 120
Score = 53.2 bits (122), Expect = 1e-06
Identities = 26/80 (32%), Positives = 48/80 (60%)
Frame = +2
Query: 38 KNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQ 217
K RK AP H R + + LS +LR+++ +++ + D V+V+RG + G++ G+V+
Sbjct: 7 KQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEE-GEVIN 65
Query: 218 VYRKKFVVYIERIQREKANG 277
V K V+++E + EK +G
Sbjct: 66 VDLDKAVIHVEDVTLEKTDG 85
>UniRef50_Q6L1B6 Cluster: Large subunit ribosomal protein L24P; n=2;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L24P - Picrophilus torridus
Length = 154
Score = 51.2 bits (117), Expect = 4e-06
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +2
Query: 101 LSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 280
LSK+LR+K+ ++ P+ K D V+++ G KG+ GKV+ V K V IE + KA+G
Sbjct: 10 LSKDLRKKYGIRRFPVAKGDIVKIISGSRKGEG-GKVVDVDHKTMKVSIEGVTISKADGK 68
Query: 281 TAYVGIHPSKCVIVKLKMN 337
I S I KL ++
Sbjct: 69 QVPFFIDHSNISITKLDLS 87
>UniRef50_Q673R7 Cluster: Ribosomal protein L24; n=2; environmental
samples|Rep: Ribosomal protein L24 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 145
Score = 43.2 bits (97), Expect = 0.001
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 20/123 (16%)
Frame = +2
Query: 20 VTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHY---- 187
V+ K R+ AP H+RR M S L + +++S+ IR D V+V+RG +
Sbjct: 2 VSKKAGKQRQAQTDAPVHVRRKRMRSRLISDEPDLQSIRSVTIRVGDTVEVLRGDFGFPN 61
Query: 188 ------KGQQVGK----------VMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVI 319
+G+++G+ ++ V K VY++ + ++G + IHPS V+
Sbjct: 62 SVKAEARGKRLGQSRGRSGVKSTIVGVDTKSGFVYVDGVTMTTSDGKEEALPIHPSNLVV 121
Query: 320 VKL 328
KL
Sbjct: 122 TKL 124
>UniRef50_UPI00005A08CE Cluster: PREDICTED: similar to 60S ribosomal
protein L26-like 1; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L26-like 1 -
Canis familiaris
Length = 165
Score = 42.3 bits (95), Expect = 0.002
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2
Query: 2 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSP 100
M FN +T NRKRH +APSH+RR +MSSP
Sbjct: 97 MNFNPFLTWGCSTNRKRHVNAPSHVRRNIMSSP 129
>UniRef50_Q30Z53 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Desulfovibrio
desulfuricans (strain G20)
Length = 107
Score = 41.9 bits (94), Expect = 0.003
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 131 VKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 268
+K IRKDD+V V+ G KG ++GKV++V RKK V +E++ K
Sbjct: 1 MKQFRIRKDDKVMVISGKDKG-KIGKVLKVLRKKDRVLVEKVNVAK 45
>UniRef50_Q2JIL6 Cluster: 50S ribosomal protein L24; n=25;
Bacteria|Rep: 50S ribosomal protein L24 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 132
Score = 37.5 bits (83), Expect = 0.059
Identities = 23/64 (35%), Positives = 40/64 (62%)
Frame = +2
Query: 65 PSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVY 244
PS IRR L+ P ++ R K M I++ D VQV+ G KG ++G+V++V+ ++ +V
Sbjct: 7 PSQIRR-LVRRPGIRKHRNSLRYK-MRIKQGDTVQVISGDDKG-KIGEVLRVFPERNMVL 63
Query: 245 IERI 256
+E +
Sbjct: 64 VEGV 67
>UniRef50_Q56435 Cluster: 50S ribosomal protein L24; n=18;
Bacteria|Rep: 50S ribosomal protein L24 - Thermus
thermophilus
Length = 110
Score = 36.7 bits (81), Expect = 0.10
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +2
Query: 140 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 256
M ++K D V V G YKG+ VGKV +V KK+ V +E +
Sbjct: 5 MHVKKGDTVLVASGKYKGR-VGKVKEVLPKKYAVIVEGV 42
>UniRef50_Q9XD25 Cluster: 50S ribosomal protein L24; n=11;
Bacteria|Rep: 50S ribosomal protein L24 - Leptospira
interrogans
Length = 119
Score = 34.3 bits (75), Expect = 0.55
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 134 KSMPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 268
K I+K+DEV + G +KG++ GKV+ + +K+ V +E + + K
Sbjct: 15 KKFRIKKNDEVICITGKHKGKR-GKVLSIDKKRDRVIVEGLNKRK 58
>UniRef50_O67569 Cluster: 50S ribosomal protein L24; n=10;
Bacteria|Rep: 50S ribosomal protein L24 - Aquifex
aeolicus
Length = 132
Score = 33.9 bits (74), Expect = 0.72
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +2
Query: 146 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYV 292
I+K D V VVRG KG+Q GKV++VY ER++R G YV
Sbjct: 6 IKKGDTVLVVRGKEKGKQ-GKVLKVY--------ERVKRRDKQGNPVYV 45
>UniRef50_Q1E1P6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 2137
Score = 33.5 bits (73), Expect = 0.95
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 125 FNVKSMPIRKDDEVQVVRGHY-KGQQVGKVMQVYRKKFVVYIERIQREKANGATAY 289
+ V MP++ E +++G Y K Q + ++F Y+ER EKA+ A+ Y
Sbjct: 88 YTVNPMPLKPSPEKSLIKGQYHKRMQSFQNATTNSREFASYLERRSPEKAHRASVY 143
>UniRef50_Q9L0C9 Cluster: 50S ribosomal protein L24; n=61;
Bacteria|Rep: 50S ribosomal protein L24 - Streptomyces
coelicolor
Length = 107
Score = 33.5 bits (73), Expect = 0.95
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +2
Query: 140 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 268
M I+K D VQV+ G KG+Q GKV+ + ++ V +E + R K
Sbjct: 1 MKIKKGDLVQVITGKDKGKQ-GKVIAAFPREDRVLVEGVNRVK 42
>UniRef50_Q9ZCR6 Cluster: 50S ribosomal protein L24; n=60;
Bacteria|Rep: 50S ribosomal protein L24 - Rickettsia
prowazekii
Length = 113
Score = 33.1 bits (72), Expect = 1.3
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 140 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 268
+ ++K DEV ++ G YKG++ GKV++V+ ++ V + + K
Sbjct: 4 LKVKKGDEVVIITGKYKGKK-GKVLKVFPEENTVVVSGVNLVK 45
>UniRef50_Q5C6X2 Cluster: Putative uncharacterized protein; n=1;
Schistosoma japonicum|Rep: Putative uncharacterized
protein - Schistosoma japonicum (Blood fluke)
Length = 96
Score = 32.7 bits (71), Expect = 1.7
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 247 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVF 152
NVY +F +HLH F NLL + Y L+ +VF
Sbjct: 7 NVYILMFFVHLHLFVNLLNSMRGLYFLSVLVF 38
>UniRef50_Q22V20 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 852
Score = 32.7 bits (71), Expect = 1.7
Identities = 21/93 (22%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +2
Query: 11 NKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPI-----RKDDEVQVV 175
++Q+ R + R+ + + +L + L+++ ++ + R+D EVQ++
Sbjct: 654 DQQIEDLRNQIRQERINRTNEQNLILSLKDNVRSLQEQLDISNQRYQEEIKRRDQEVQII 713
Query: 176 RGHYKGQQVGKVMQVYRKKFVVYIERIQREKAN 274
R Y Q V K++ +K + +ER++ EK N
Sbjct: 714 RNQY-DQSVEKIL---HQKNAIDVERLENEKYN 742
>UniRef50_O46905 Cluster: Chloroplast 50S ribosomal protein L24;
n=6; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L24 - Guillardia theta (Cryptomonas phi)
Length = 101
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/39 (38%), Positives = 27/39 (69%)
Frame = +2
Query: 140 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 256
M I++ D+VQV+ G YKG ++ +V++V RK + ++ I
Sbjct: 1 MTIKQGDKVQVIAGSYKG-EITEVLKVIRKSNSLILKNI 38
>UniRef50_Q1KVT3 Cluster: DNA-directed RNA polymerase; n=1;
Scenedesmus obliquus|Rep: DNA-directed RNA polymerase -
Scenedesmus obliquus
Length = 1529
Score = 31.9 bits (69), Expect = 2.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = -1
Query: 247 NVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRHGFYIE 125
N++N F + L+ F +LAF+ Y ++F F +H F E
Sbjct: 614 NLFNLFFDVSLN-FGKILAFLKLYYEIDFCSFVQKHSFDFE 653
>UniRef50_P60628 Cluster: 50S ribosomal protein L24; n=17;
Corynebacterineae|Rep: 50S ribosomal protein L24 -
Mycobacterium bovis
Length = 105
Score = 31.9 bits (69), Expect = 2.9
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2
Query: 140 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANGA 280
M + K D V V+ G KG + GKV+Q Y + V +E + R K + A
Sbjct: 1 MKVHKGDTVLVISGKDKGAK-GKVLQAYPDRNRVLVEGVNRIKKHTA 46
>UniRef50_Q5QXW9 Cluster: 50S ribosomal protein L24; n=9;
Bacteria|Rep: 50S ribosomal protein L24 - Idiomarina
loihiensis
Length = 104
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 146 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 256
I++DDEV V+ G KG+Q GKV++V K V +E +
Sbjct: 5 IKRDDEVVVLAGKDKGKQ-GKVLKVLTDKDRVIVEGV 40
>UniRef50_A6M1U7 Cluster: Transcriptional regulator, GntR family;
n=1; Clostridium beijerinckii NCIMB 8052|Rep:
Transcriptional regulator, GntR family - Clostridium
beijerinckii NCIMB 8052
Length = 235
Score = 31.5 bits (68), Expect = 3.8
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 98 PLSKELRQKFNVKSMPIRKDDEVQVVRGH-YKGQQVGKVMQVYRKKFVVYIERI 256
P +EL +KFNV IRK E+ V +G+ Y+ Q G ++ + K I I
Sbjct: 28 PTEEELIKKFNVSKNTIRKAIEILVTKGYVYRVQGSGIFLREFAKNGCAQIRDI 81
>UniRef50_Q64E17 Cluster: Ribosomal protein L21E; n=3; environmental
samples|Rep: Ribosomal protein L21E - uncultured
archaeon GZfos17A3
Length = 130
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +2
Query: 11 NKQVTSSR--RKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 184
NKQ+ S RK ++ S P R + SP+SK ++Q +S+ IR D V H
Sbjct: 18 NKQMARSHGERKRTRKKLSKPKRARGL---SPISKAIQQFEPGESVHIRIDPSVHKGMPH 74
Query: 185 YKGQ-QVGKVMQVYRKKFVVYIERIQREK 268
+ GKV+ + F+V I +R++
Sbjct: 75 QRFHGMTGKVIGERGRAFIVEISDGKRKR 103
>UniRef50_Q8A5N4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 857
Score = 31.1 bits (67), Expect = 5.1
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +2
Query: 32 RRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVR 178
RRK K+ + P VLMS P+ +E + K MP ++D E +VR
Sbjct: 573 RRKRGKQRNAVPES-SSVLMSPPVGREPDKSVLGKEMPAKEDFESSIVR 620
>UniRef50_Q2IJ78 Cluster: 50S ribosomal protein L24; n=2;
Anaeromyxobacter|Rep: 50S ribosomal protein L24 -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 106
Score = 31.1 bits (67), Expect = 5.1
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +2
Query: 146 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 268
IRK D V+V+ G KG + G+V++V R+ V +E++ K
Sbjct: 4 IRKGDTVKVIAGKEKG-KTGRVLEVLREDGRVRVEKLMTVK 43
>UniRef50_Q8YLR0 Cluster: Alr5236 protein; n=1; Nostoc sp. PCC
7120|Rep: Alr5236 protein - Anabaena sp. (strain PCC
7120)
Length = 454
Score = 30.7 bits (66), Expect = 6.7
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = -1
Query: 268 LFSLNPLNVYNKLFTIHLHHFANLLAFVVSTYNL-NFIVFANRHGFYIEFLS*FL 107
+FSL L V+ KL T L + A L AF++ NL N +VF N G Y F S F+
Sbjct: 380 IFSL--LGVFLKLKTPFLRNLA-LAAFLLHAINLTNQLVFNNTLGIYYWFFSGFI 431
>UniRef50_Q05FN1 Cluster: Putative alanyl-tRNA synthetase; n=1;
Candidatus Carsonella ruddii PV|Rep: Putative
alanyl-tRNA synthetase - Carsonella ruddii (strain PV)
Length = 328
Score = 30.7 bits (66), Expect = 6.7
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = -1
Query: 250 LNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFANRH 140
LN FTI+++ + N++ ++ N+N ++F N++
Sbjct: 104 LNFKKLFFTININDYLNIILILILKININQVIFTNKN 140
>UniRef50_Q4Z6T0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 663
Score = 30.7 bits (66), Expect = 6.7
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = -1
Query: 328 QLDNHTL*RVNADICCCTIGLFSLNPLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVFA 149
Q++ + L ++N++ TI LF L ++N LF L+ L F++ Y+L F++FA
Sbjct: 596 QININILDKINSNTL--TIFLFCNITLGIFNILFQSLLYPLV-LAIFILILYSLFFLIFA 652
Query: 148 N 146
N
Sbjct: 653 N 653
>UniRef50_Q5UNZ4 Cluster: Uncharacterized protein R744; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein R744 - Mimivirus
Length = 181
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 301 VNADICCCTIGLFSLNPLNVYNKLFTI 221
+N D C +IG+FS+N N YNKL I
Sbjct: 52 INMD-CTYSIGIFSINVYNKYNKLICI 77
>UniRef50_Q0EW47 Cluster: Ribosomal protein L24; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ribosomal protein L24 -
Mariprofundus ferrooxydans PV-1
Length = 109
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 146 IRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREK 268
IRKDDEV ++ G KG + GKV++V + V + ++ K
Sbjct: 9 IRKDDEVIIIAGRDKGAR-GKVIRVLPQDSSVLVAKVNMIK 48
>UniRef50_A6CIH2 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. SG-1|Rep: Putative uncharacterized protein
- Bacillus sp. SG-1
Length = 117
Score = 30.3 bits (65), Expect = 8.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3
Query: 212 SLCQPVGLCSVHVQPELHRLCE*AWIL 132
+LC P G+C V PEL R+ A+IL
Sbjct: 10 ALCCPTGVCGPSVDPELTRMASAAFIL 36
>UniRef50_Q8ILK9 Cluster: DNA-directed DNA polymerase, putative; n=1;
Plasmodium falciparum 3D7|Rep: DNA-directed DNA
polymerase, putative - Plasmodium falciparum (isolate
3D7)
Length = 1236
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/42 (28%), Positives = 26/42 (61%)
Frame = -1
Query: 277 TIGLFSLNPLNVYNKLFTIHLHHFANLLAFVVSTYNLNFIVF 152
+IG+ +N + +Y+K++ + H L ++ S+YN+N + F
Sbjct: 1047 SIGIDLINEIRMYDKIYLYNKFH----LCYICSSYNINIVSF 1084
>UniRef50_Q7RQ89 Cluster: C2 domain, putative; n=9; Plasmodium
(Vinckeia)|Rep: C2 domain, putative - Plasmodium yoelii
yoelii
Length = 1622
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/87 (19%), Positives = 38/87 (43%)
Frame = +2
Query: 5 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 184
K N + +K +K+H + + + K+ K + +P KDDE + +
Sbjct: 1456 KENDKENEKVKKKKKKHRDEDNKEKTKITKGDKQKKSNSKNKKEIIPEVKDDETNLTKEI 1515
Query: 185 YKGQQVGKVMQVYRKKFVVYIERIQRE 265
G++ ++ Q +K ++ +I+ E
Sbjct: 1516 NYGEKTKEIDQENQKSYIALESQIKNE 1542
>UniRef50_Q16LQ3 Cluster: Prominin (Prom) protein; n=3;
Culicidae|Rep: Prominin (Prom) protein - Aedes aegypti
(Yellowfever mosquito)
Length = 905
Score = 30.3 bits (65), Expect = 8.9
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = +2
Query: 53 HFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVY 223
+F+ H R+ S SK +Q N K PIR D ++ RG+ QV K+ Y
Sbjct: 587 YFNLNKHYERIGTQSARSKWKQQATNRKVDPIRIADVIESCRGNNSIYQVLKLSNFY 643
>UniRef50_Q67JV4 Cluster: 50S ribosomal protein L24; n=5;
Bacteria|Rep: 50S ribosomal protein L24 -
Symbiobacterium thermophilum
Length = 83
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +2
Query: 140 MPIRKDDEVQVVRGHYKGQQVGKVMQVYRKKFVVYIERI 256
M ++KD+ V V+ G KG+Q GKV++V K+ V +E +
Sbjct: 1 MHVKKDEIVVVITGKDKGKQ-GKVLRVLPKENRVVVEGV 38
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,872,290
Number of Sequences: 1657284
Number of extensions: 6348584
Number of successful extensions: 17279
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 16915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17250
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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