Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2485
(600 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 25 0.75
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 5.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 5.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 5.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.2
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.6 bits (51), Expect = 0.75
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 23 RRSGNDANETDEWKLHVHHEQARSTQRGR 109
+RSG+ + E D +K+ H E +R++ G+
Sbjct: 700 KRSGSHSWEGDSFKVSKHEEVSRTSTAGQ 728
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 43 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 82
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 43 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 82
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 43 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 82
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 43 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 82
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 43 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 82
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 43 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 82
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 43 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 82
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 292 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 331
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 292 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 331
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 292 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 331
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 292 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 331
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 292 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 331
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 292 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 331
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 5.3
Identities = 10/40 (25%), Positives = 19/40 (47%)
Frame = +2
Query: 11 RETRRRSGNDANETDEWKLHVHHEQARSTQRGRRQVHRLL 130
RE ++S + E E++ +RGR + HR++
Sbjct: 292 REREQKSYKNEREYREYRETSRERSRDRRERGRSREHRII 331
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 9.2
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 80 EQARSTQRGRRQVHR 124
E R+ QRG VHR
Sbjct: 1050 EAVRAVQRGEMSVHR 1064
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,575
Number of Sequences: 438
Number of extensions: 2434
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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