Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2463
         (530 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...   122   2e-30
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...   121   5e-30
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    54   7e-10
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    24   0.84 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    24   0.84 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    24   0.84 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.5  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           21   7.9  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           21   7.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.9  

>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score =  122 bits (294), Expect = 2e-30
 Identities = 58/68 (85%), Positives = 61/68 (89%)
 Frame = +3

Query: 15  KXKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAV 194
           K K DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAV
Sbjct: 376 KEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAV 435

Query: 195 GVIKAVNF 218
           GVIKAV F
Sbjct: 436 GVIKAVTF 443


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score =  121 bits (291), Expect = 5e-30
 Identities = 57/68 (83%), Positives = 62/68 (91%)
 Frame = +3

Query: 15  KXKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAV 194
           K K DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAV
Sbjct: 376 KEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAV 435

Query: 195 GVIKAVNF 218
           GVIK+V F
Sbjct: 436 GVIKSVTF 443


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 54.4 bits (125), Expect = 7e-10
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +3

Query: 15  KXKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 113
           K K DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 87  KEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 325 KYRSCMKNCAVNSSSYFLPLVAFS 254
           K+  C+KN A   SSYF+  + F+
Sbjct: 94  KFYDCLKNSADTISSYFVGKMYFN 117


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 325 KYRSCMKNCAVNSSSYFLPLVAFS 254
           K+  C+KN A   SSYF+  + F+
Sbjct: 99  KFYDCLKNSADTISSYFVGKMYFN 122


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 0.84
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 325 KYRSCMKNCAVNSSSYFLPLVAFS 254
           K+  C+KN A   SSYF+  + F+
Sbjct: 99  KFYDCLKNSADTISSYFVGKMYFN 122


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 364 CSPFFLRNTFR*MKYRSCMKN 302
           C  FF R+  + ++YR C KN
Sbjct: 87  CKGFFRRSIQQKIQYRPCTKN 107


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 57  NPKSIKSGDAAIVNLVPSKPLC 122
           NP+    G   +V L PS P C
Sbjct: 66  NPEHKPPGPKDLVYLEPSPPFC 87


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 57  NPKSIKSGDAAIVNLVPSKPLC 122
           NP+    G   +V L PS P C
Sbjct: 67  NPEHKPPGPKDLVYLEPSPPFC 88


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 79  EMQPLSTWYLPSL 117
           +  P+  WY+PSL
Sbjct: 589 DKNPVQLWYVPSL 601


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,061
Number of Sequences: 438
Number of extensions: 2305
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)