Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2385
         (600 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111551-1|AAI11552.1|  304|Homo sapiens PTC7 protein phosphatas...    85   1e-16
AY357944-1|AAQ57274.1|  303|Homo sapiens T-cell activation prote...    85   1e-16
AF385435-1|AAM43836.1|  304|Homo sapiens T-cell activation prote...    85   1e-16

>BC111551-1|AAI11552.1|  304|Homo sapiens PTC7 protein phosphatase
           homolog (S. cerevisiae) protein.
          Length = 304

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 53/134 (39%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
 Frame = +2

Query: 182 MQSIFWTGRLLSRALRNGLASISSAAELNVFNKKHPYLVSVVXGFPKDIANGRTRKGQ-F 358
           M S+   GRL++RA+  GL+     A           LV+   GF KD   G  +KG  +
Sbjct: 1   MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYG--LVTAGCGFGKDFRKGLLKKGACY 58

Query: 359 GDDAWFATNFQHXXXXXXXXXXXXWRAYGIDPGEFSSYLMRTCERLVQMGHFKLSXPGDL 538
           GDDA F    +             WR YG+DP +FS  LMRTCERLV+ G F  S P  +
Sbjct: 59  GDDACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGI 118

Query: 539 LAQSYYELLXXKXP 580
           L  SY ELL  K P
Sbjct: 119 LTTSYCELLQNKVP 132


>AY357944-1|AAQ57274.1|  303|Homo sapiens T-cell activation protein
           phosphatase 2C-like protein protein.
          Length = 303

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 53/134 (39%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
 Frame = +2

Query: 182 MQSIFWTGRLLSRALRNGLASISSAAELNVFNKKHPYLVSVVXGFPKDIANGRTRKGQ-F 358
           M S+   GRL++RA+  GL+     A     +     LV+   GF KD   G  +KG  +
Sbjct: 1   MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGDYG---LVTAGCGFGKDFRKGLLKKGACY 57

Query: 359 GDDAWFATNFQHXXXXXXXXXXXXWRAYGIDPGEFSSYLMRTCERLVQMGHFKLSXPGDL 538
           GDDA F    +             WR YG+DP +FS  LMRTCERLV+ G F  S P  +
Sbjct: 58  GDDACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGI 117

Query: 539 LAQSYYELLXXKXP 580
           L  SY ELL  K P
Sbjct: 118 LTTSYRELLQNKVP 131


>AF385435-1|AAM43836.1|  304|Homo sapiens T-cell activation protein
           phosphatase 2C protein.
          Length = 304

 Score = 85.4 bits (202), Expect = 1e-16
 Identities = 53/134 (39%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
 Frame = +2

Query: 182 MQSIFWTGRLLSRALRNGLASISSAAELNVFNKKHPYLVSVVXGFPKDIANGRTRKGQ-F 358
           M S+   GRL++RA+  GL+     A           LV+   GF KD   G  +KG  +
Sbjct: 1   MFSVLSYGRLVARAVLGGLSQTDPRAGGGGGGDYG--LVTAGCGFGKDFRKGLLKKGACY 58

Query: 359 GDDAWFATNFQHXXXXXXXXXXXXWRAYGIDPGEFSSYLMRTCERLVQMGHFKLSXPGDL 538
           GDDA F    +             WR YG+DP +FS  LMRTCERLV+ G F  S P  +
Sbjct: 59  GDDACFVARHRSADVLGVADGVGGWRDYGVDPSQFSGTLMRTCERLVKEGRFVPSNPIGI 118

Query: 539 LAQSYYELLXXKXP 580
           L  SY ELL  K P
Sbjct: 119 LTTSYCELLQNKVP 132


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,611,370
Number of Sequences: 237096
Number of extensions: 1506990
Number of successful extensions: 1935
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1935
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)