Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2365
         (300 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   1.4  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   2.5  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   4.3  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    20   5.7  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               20   7.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    20   7.6  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 1.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 195 ISCRVAPVVPERQDACRAHAERSVR 269
           ISCR   V  E   ACR   E  +R
Sbjct: 627 ISCRQGTVPDETHSACRDIPEEFLR 651


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 293 PRLPSRARSHRSLSMRST 240
           P LPSR +SH S+   +T
Sbjct: 532 PVLPSRFQSHPSIDSANT 549


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 4.3
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = +3

Query: 123 WRKVIIRIVRSVKSGTVRFVYWVLISC 203
           WR +  R+     SG ++ +++++I C
Sbjct: 128 WRPLRSRLSPIFTSGKLKEMFYLIIEC 154


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 267 SPISQHALYTRPVAPALPEPP 205
           SP  QH   T  +   LP PP
Sbjct: 359 SPSVQHEFVTFDLDEPLPPPP 379


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +2

Query: 95  IDLLRCIYL 121
           I +LRCIYL
Sbjct: 2   ISMLRCIYL 10


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 19.8 bits (39), Expect = 7.6
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 143 PYYHFPPTSRCTVTN 99
           PY  FPP +R  + N
Sbjct: 76  PYPRFPPYNRMDMRN 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,867
Number of Sequences: 438
Number of extensions: 1955
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)