Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2358
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   4.3  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    22   5.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   5.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   7.5  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   9.9  

>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +3

Query: 216 HLQGTQYTEEVKYFFNFFFLW 278
           HL+G  Y  ++       FLW
Sbjct: 201 HLEGPSYNSDIFAMIGTIFLW 221


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 20 TYYVIPKLTLRQNCK 64
          +Y+V P ++++ NCK
Sbjct: 19 SYFVTPTMSIKCNCK 33


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 360 FFIYLFYNHLSLFRK 316
           +FI+L++N L  FR+
Sbjct: 21  YFIFLYFNSLVRFRR 35


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 431 VLITFYLYFHYLNGVFF 381
           VLI  Y    Y++GVF+
Sbjct: 321 VLIIIYTILTYMSGVFY 337


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
 Frame = +3

Query: 447 GRFPHSRNVRN-NVRKLLFKNLVFT 518
           G  P + +  N N  K +FKN +FT
Sbjct: 68  GVAPGTSSATNPNAMKTIFKNTIFT 92


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,294
Number of Sequences: 438
Number of extensions: 2786
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)