Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2326
(400 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 229 9e-63
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 228 2e-62
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 118 2e-29
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 88 4e-20
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 26 0.18
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.56
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 5.2
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 5.2
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 5.2
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 20 9.1
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 229 bits (560), Expect = 9e-63
Identities = 109/124 (87%), Positives = 109/124 (87%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVL 206
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKR I KFE EAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 207 DKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXAGX 386
DKL AERERGITIDIALWKFETSK YVT IDAPGHRDF NMITGTS ADCAVLI AG
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 387 AECE 398
E E
Sbjct: 121 GEFE 124
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 228 bits (557), Expect = 2e-62
Identities = 108/124 (87%), Positives = 109/124 (87%)
Frame = +3
Query: 27 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRXIXKFEXEAQEMGKGSFKYAWVL 206
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKR I KFE EAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 207 DKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXAGX 386
DKL AERERGITIDIALWKFET+K YVT IDAPGHRDF NMITGTS ADCAVLI AG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 387 AECE 398
E E
Sbjct: 121 GEFE 124
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 118 bits (284), Expect = 2e-29
Identities = 56/67 (83%), Positives = 56/67 (83%)
Frame = +3
Query: 198 WVLDKLXAERERGITIDIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXX 377
WVLDKL AERERGITIDIALWKFETSK YVT IDAPGHRDF NMITGTS ADCAVLI
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 378 AGXAECE 398
AG E E
Sbjct: 61 AGTGEFE 67
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 87.8 bits (208), Expect = 4e-20
Identities = 41/51 (80%), Positives = 41/51 (80%)
Frame = +3
Query: 246 DIALWKFETSKXYVTXIDAPGHRDFFXNMITGTSXADCAVLIXXAGXAECE 398
DIALWKFETSK YVT IDAPGHRDF NMITGTS ADCAVLI AG E E
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 51
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.8 bits (54), Expect = 0.18
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 285 VTXIDAPGHRDFFXNMITGTSXADCAVLIXXA 380
VT +D PGH F G D VL+ A
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAA 226
Score = 25.4 bits (53), Expect = 0.24
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 39 KTHINIVVIGHVDSGKST 92
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.56
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 48 INIVVIGHVDSGKST 92
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 129 DKRXIXKFEXEAQEMG 176
DK+ KFE EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 129 DKRXIXKFEXEAQEMG 176
DK+ KFE EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 129 DKRXIXKFEXEAQEMG 176
DK+ KFE EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 20.2 bits (40), Expect = 9.1
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -1
Query: 229 SRSAFSLSNTQAYLKDPLPISWASFSN 149
+RS F L N +KD L ++ F+N
Sbjct: 78 TRSPFLLLNDPELIKDILIRDFSKFAN 104
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,348
Number of Sequences: 438
Number of extensions: 1302
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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