Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2273
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC067357-1|AAH67357.1| 600|Homo sapiens CKAP4 protein protein. 33 0.98
Z23024-1|CAA80560.1| 439|Homo sapiens rhoGAP protein protein. 31 3.0
U62794-1|AAB66594.1| 223|Homo sapiens CDC42 GAP-related protein... 31 3.0
U02570-1|AAA16142.1| 462|Homo sapiens CDC42 GTPase-activating p... 31 3.0
BC018118-1|AAH18118.1| 439|Homo sapiens Rho GTPase activating p... 31 3.0
AY311388-1|AAP74958.1| 2551|Homo sapiens FEX2 protein. 30 6.9
AJ295695-1|CAC82105.1| 2551|Homo sapiens stabilin-2 protein. 30 6.9
AB052958-1|BAC15608.1| 2551|Homo sapiens FELE-2 protein. 30 6.9
AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like alpha-2... 30 9.1
AL691523-7|CAI17372.1| 274|Homo sapiens DNA fragmentation facto... 30 9.1
AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein. 30 9.1
>BC067357-1|AAH67357.1| 600|Homo sapiens CKAP4 protein protein.
Length = 600
Score = 33.1 bits (72), Expect = 0.98
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +3
Query: 288 RHRTPVHRDLRMTWKFHQPCRPSAICSTSRCTRAATLRSCRGSRRWSAGDCTPEAS 455
R R P R RMTW+ + R S+ R TR++T S R +RR + AS
Sbjct: 42 RRRVPTRRAARMTWRRSRRRRRSSRRRRPRRTRSSTRSSTRRTRRTARAATAAAAS 97
>Z23024-1|CAA80560.1| 439|Homo sapiens rhoGAP protein protein.
Length = 439
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 242 LELSEWLRRTQRRSRTAPDPCPPRP 316
L+ ++L+ TQ+ TAP P PPRP
Sbjct: 211 LKYDDFLKSTQKSPATAPKPMPPRP 235
>U62794-1|AAB66594.1| 223|Homo sapiens CDC42 GAP-related protein
protein.
Length = 223
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 242 LELSEWLRRTQRRSRTAPDPCPPRP 316
L+ ++L+ TQ+ TAP P PPRP
Sbjct: 107 LKYDDFLKSTQKSPATAPKPMPPRP 131
>U02570-1|AAA16142.1| 462|Homo sapiens CDC42 GTPase-activating
protein protein.
Length = 462
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 242 LELSEWLRRTQRRSRTAPDPCPPRP 316
L+ ++L+ TQ+ TAP P PPRP
Sbjct: 234 LKYDDFLKSTQKSPATAPKPMPPRP 258
>BC018118-1|AAH18118.1| 439|Homo sapiens Rho GTPase activating
protein 1 protein.
Length = 439
Score = 31.5 bits (68), Expect = 3.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 242 LELSEWLRRTQRRSRTAPDPCPPRP 316
L+ ++L+ TQ+ TAP P PPRP
Sbjct: 211 LKYDDFLKSTQKSPATAPKPMPPRP 235
>AY311388-1|AAP74958.1| 2551|Homo sapiens FEX2 protein.
Length = 2551
Score = 30.3 bits (65), Expect = 6.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 106 NLCVNFVCSDHLICRYAGPSAGPCMTPEG 192
N C+ +C H C Y GP+ C EG
Sbjct: 239 NPCLRKICHPHAHCTYLGPNRHSCTCQEG 267
>AJ295695-1|CAC82105.1| 2551|Homo sapiens stabilin-2 protein.
Length = 2551
Score = 30.3 bits (65), Expect = 6.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 106 NLCVNFVCSDHLICRYAGPSAGPCMTPEG 192
N C+ +C H C Y GP+ C EG
Sbjct: 239 NPCLRKICHPHAHCTYLGPNRHSCTCQEG 267
>AB052958-1|BAC15608.1| 2551|Homo sapiens FELE-2 protein.
Length = 2551
Score = 30.3 bits (65), Expect = 6.9
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 106 NLCVNFVCSDHLICRYAGPSAGPCMTPEG 192
N C+ +C H C Y GP+ C EG
Sbjct: 239 NPCLRKICHPHAHCTYLGPNRHSCTCQEG 267
>AY101765-1|AAM50084.1| 1885|Homo sapiens C3 and PZP-like
alpha-2-macroglobulin domain containing 8 protein.
Length = 1885
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 289 RSGSSLSPSQPFRQLESIDLSSKTWVSNPVARVLQESCTVQQMARRS 149
RSG L+P+Q F++LE D+S VS T Q+ R S
Sbjct: 627 RSGFRLTPAQVFQELEDYDVSDSFGVSREDGPFWWAGLTAQRRRRSS 673
>AL691523-7|CAI17372.1| 274|Homo sapiens DNA fragmentation factor,
40kDa, beta polypeptideptor 2 protein.
Length = 274
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = -1
Query: 520 LFIPYAFDTSDVVDRQNAARTPEASGVQSPADHLLD---PLQERSVAALVHLLVEQIA 356
LF+P D SD+ +A P+ +Q+ L D P ++R +A L+H + + IA
Sbjct: 10 LFVPLVADVSDIRRFLSAFHEPQVGLIQAAQQLLCDEQAPQRQRLLADLLHNVSQNIA 67
>AB033109-1|BAA86597.1| 1884|Homo sapiens KIAA1283 protein protein.
Length = 1884
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -1
Query: 289 RSGSSLSPSQPFRQLESIDLSSKTWVSNPVARVLQESCTVQQMARRS 149
RSG L+P+Q F++LE D+S VS T Q+ R S
Sbjct: 626 RSGFRLTPAQVFQELEDYDVSDSFGVSREDGPFWWAGLTAQRRRRSS 672
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,162,678
Number of Sequences: 237096
Number of extensions: 2396102
Number of successful extensions: 7792
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7771
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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