Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2235
(826 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 360 4e-99
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 360 4e-99
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 360 4e-99
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 360 4e-99
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 360 4e-99
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 360 4e-99
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 360 4e-99
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 358 2e-98
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 351 2e-96
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 351 2e-96
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 351 2e-96
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 351 2e-96
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 351 2e-96
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 348 1e-95
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 336 7e-92
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 334 2e-91
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 333 5e-91
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 100 7e-21
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 2.2
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 5.1
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 31 6.7
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 6.7
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 360 bits (885), Expect = 4e-99
Identities = 160/215 (74%), Positives = 187/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGR+G I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGKGNKPWI 236
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 360 bits (885), Expect = 4e-99
Identities = 160/215 (74%), Positives = 187/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGR+G I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGKGNKPWI 236
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 360 bits (885), Expect = 4e-99
Identities = 160/215 (74%), Positives = 187/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGR+G I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGKGNKPWI 236
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 360 bits (885), Expect = 4e-99
Identities = 160/215 (74%), Positives = 187/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGR+G I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGKGNKPWI 236
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 360 bits (885), Expect = 4e-99
Identities = 160/215 (74%), Positives = 187/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGR+G I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGKGNKPWI 236
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 360 bits (885), Expect = 4e-99
Identities = 160/215 (74%), Positives = 187/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGR+G I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGKGNKPWI 236
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 360 bits (885), Expect = 4e-99
Identities = 160/215 (74%), Positives = 187/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGR+G I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGKGNKPWI 236
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 358 bits (880), Expect = 2e-98
Identities = 159/215 (73%), Positives = 186/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG
Sbjct: 127 RKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGR+G I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRIGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGKGNKPWI 236
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 351 bits (863), Expect = 2e-96
Identities = 154/215 (71%), Positives = 185/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGRVG I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 33.9 bits (74), Expect = 0.72
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IG G K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGNGNKPWI 236
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 351 bits (863), Expect = 2e-96
Identities = 154/215 (71%), Positives = 185/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 6 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICM 65
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV
Sbjct: 66 QRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKV 125
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG
Sbjct: 126 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 185
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGRVG I +RERHPGSFD+VH+ +G++ + R
Sbjct: 186 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATR 220
Score = 33.9 bits (74), Expect = 0.72
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IG G K +I
Sbjct: 208 HVKDANGNSFATRLSNIFVIGNGNKPWI 235
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 351 bits (863), Expect = 2e-96
Identities = 154/215 (71%), Positives = 185/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGRVG I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 33.9 bits (74), Expect = 0.72
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IG G K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGNGNKPWI 236
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 351 bits (863), Expect = 2e-96
Identities = 154/215 (71%), Positives = 185/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGRVG I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 33.9 bits (74), Expect = 0.72
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IG G K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGNGNKPWI 236
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 351 bits (863), Expect = 2e-96
Identities = 154/215 (71%), Positives = 185/215 (86%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGRVG I +RERHPGSFD+VH+ +G++ + R
Sbjct: 187 ANLGRVGVITNRERHPGSFDVVHVKDANGNSFATR 221
Score = 33.9 bits (74), Expect = 0.72
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IG G K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGNGNKPWI 236
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 348 bits (856), Expect = 1e-95
Identities = 153/215 (71%), Positives = 184/215 (85%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QR IK+DGKVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV
Sbjct: 67 QRFIKIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDP+IKVND++Q+D+ T KI++FIKF++GNLCM+ GG
Sbjct: 127 RKITVGVKGIPHLVTHDARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGRVG I +RERHPGSF +VH+ +G++ + R
Sbjct: 187 ANLGRVGVITNRERHPGSFGVVHVKDANGNSFATR 221
Score = 33.9 bits (74), Expect = 0.72
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IG G K +I
Sbjct: 209 HVKDANGNSFATRLSNIFVIGNGNKPWI 236
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 336 bits (825), Expect = 7e-92
Identities = 149/201 (74%), Positives = 175/201 (87%)
Frame = +1
Query: 43 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 222
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 223 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLV 402
TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LV
Sbjct: 61 TYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLV 120
Query: 403 THDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRER 582
THD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +RER
Sbjct: 121 THDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRER 180
Query: 583 HPGSFDIVHIXGLHGDTPSPR 645
HPGSFD+VH+ +G++ + R
Sbjct: 181 HPGSFDVVHVKDANGNSFATR 201
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 189 HVKDANGNSFATRLSNIFVIGKGNKPWI 216
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 334 bits (822), Expect = 2e-91
Identities = 147/215 (68%), Positives = 179/215 (83%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV KI
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICM 66
Query: 181 QRLIKVDGKVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
Q +K+DGKVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV
Sbjct: 67 QHFLKIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGG 540
+++ G K +P+LVTHD RTIRYPDPLIKVND++Q+D+ T KI FIKF++GN+CM+ G
Sbjct: 127 RKITVGTKGIPHLVTHDARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAG 186
Query: 541 RNLGRVGTIVSRERHPGSFDIVHIXGLHGDTPSPR 645
NLGRVG I +RERHPGS D+VH+ +G++ + R
Sbjct: 187 ANLGRVGVITNRERHPGSCDVVHVKDANGNSFATR 221
Score = 33.1 bits (72), Expect = 1.3
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT ++N+F+IG G K +I
Sbjct: 209 HVKDANGNSFATRISNIFVIGNGNKPWI 236
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 333 bits (818), Expect = 5e-91
Identities = 150/203 (73%), Positives = 176/203 (86%)
Frame = +1
Query: 37 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 216
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 217 DPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPY 396
D TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+
Sbjct: 60 DITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPH 119
Query: 397 LVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSR 576
LVTHD RTIRYPDPLIKVND+IQ+D+ T KI DFIKF++GNLCM+TGG NLGR+G I +R
Sbjct: 120 LVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNR 179
Query: 577 ERHPGSFDIVHIXGLHGDTPSPR 645
ERHPGSFD+VH+ +G++ + R
Sbjct: 180 ERHPGSFDVVHVKDANGNSFATR 202
Score = 35.9 bits (79), Expect = 0.18
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +3
Query: 609 HQXTPRGHTFATXLNNVFIIGKGTKAYI 692
H G++FAT L+N+F+IGKG K +I
Sbjct: 190 HVKDANGNSFATRLSNIFVIGKGNKPWI 217
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 100 bits (239), Expect = 7e-21
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 150
KHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 7 KHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 223 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 369
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 223 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 369
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 30.7 bits (66), Expect = 6.7
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 64 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 231
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 12 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 70
Query: 232 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 324
A +++ I + + + + D + + HRI
Sbjct: 71 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 102
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 30.7 bits (66), Expect = 6.7
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Frame = +1
Query: 64 APRPSTGPHKLRECLPL----VIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYP 231
A +P P +E PL + +++Y L E+ KQRLIK D +++T + P
Sbjct: 757 ASKPKVPPKSEKENDPLRTPEALPEEKKIEYRLLKEEIANREKQRLIKSD-QLKTSSSSP 815
Query: 232 AGF-MDVVSIEKTNELFRLIYDVKGRFTIHRI 324
A +++ I + + + + D + + HRI
Sbjct: 816 ANSDVEIDGIGRIAMVTKQVTDAESKLKKHRI 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,931,372
Number of Sequences: 237096
Number of extensions: 2861246
Number of successful extensions: 16336
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16324
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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