Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2231
         (559 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   0.91 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   2.1  
DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex det...    21   8.4  
DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex det...    21   8.4  
DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex det...    21   8.4  
DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex det...    21   8.4  
DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex det...    21   8.4  
DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex det...    21   8.4  
DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex det...    21   8.4  
DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex det...    21   8.4  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 121 PLFFCSVTFFFGSASKNYNASATCCWNTNN 32
           P   CS+    G A K Y A   CCW+  N
Sbjct: 583 PESVCSLPCEVGQAKK-YVAGEQCCWHCFN 611


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 99  PFFLAVPVRITMPVPP 52
           P  LA+PVR T+ +PP
Sbjct: 451 PLDLAIPVRETLILPP 466


>DQ325102-1|ABD14116.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 85  SASKNYNASATCCWNTNNSF 26
           S S NYN S    +N NN++
Sbjct: 84  SLSNNYNYSNYNNYNNNNNY 103


>DQ325101-1|ABD14115.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 85  SASKNYNASATCCWNTNNSF 26
           S S NYN S    +N NN++
Sbjct: 84  SLSNNYNYSNYNNYNNNNNY 103


>DQ325100-1|ABD14114.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 85  SASKNYNASATCCWNTNNSF 26
           S S NYN S    +N NN++
Sbjct: 84  SLSNNYNYSNYNNYNNNNNY 103


>DQ325099-1|ABD14113.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 85  SASKNYNASATCCWNTNNSF 26
           S S NYN S    +N NN++
Sbjct: 84  SLSNNYNYSNYNNYNNNNNY 103


>DQ325098-1|ABD14112.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 85  SASKNYNASATCCWNTNNSF 26
           S S NYN S    +N NN++
Sbjct: 84  SLSNNYNYSNYNNYNNNNNY 103


>DQ325097-1|ABD14111.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 85  SASKNYNASATCCWNTNNSF 26
           S S NYN S    +N NN++
Sbjct: 84  SLSNNYNYSNYNNYNNNNNY 103


>DQ325096-1|ABD14110.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 85  SASKNYNASATCCWNTNNSF 26
           S S NYN S    +N NN++
Sbjct: 84  SLSNNYNYSNYNNYNNNNNY 103


>DQ325095-1|ABD14109.1|  183|Apis mellifera complementary sex
           determiner protein.
          Length = 183

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 85  SASKNYNASATCCWNTNNSF 26
           S S NYN S    +N NN++
Sbjct: 84  SLSNNYNYSNYNNYNNNNNY 103


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,698
Number of Sequences: 438
Number of extensions: 2607
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)