Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2229
         (560 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    24   0.91 
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    24   0.91 
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   3.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   6.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   6.4  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   6.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   6.4  

>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 338 NGDEWKATSISGPREVT 288
           NGDEW  TS SG    T
Sbjct: 42  NGDEWTFTSSSGDNTYT 58


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 24.2 bits (50), Expect = 0.91
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -1

Query: 338 NGDEWKATSISGPREVT 288
           NGDEW  TS SG    T
Sbjct: 44  NGDEWTFTSSSGDNTYT 60


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 172 AVRAWRECTGERDXLI 219
           A+  W++C G+ D L+
Sbjct: 196 AIEIWKQCEGKIDYLV 211


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 3   PNYPGMYPSKRY 38
           P YPG YP+  Y
Sbjct: 290 PFYPGYYPTMTY 301


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 3   PNYPGMYPSKRY 38
           P YPG YP+  Y
Sbjct: 290 PFYPGYYPTMTY 301


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 472 QSTRERTRRSVTPWSXGPRGC 410
           + T  R   +  P+S GPR C
Sbjct: 468 EKTANRHYYAFVPFSAGPRSC 488


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 120 FVGVLLSNRNHRVFARWYVFLSE 52
           FV +L+S+   R+F +  VFL E
Sbjct: 67  FVRLLMSSEELRLFDKIRVFLDE 89


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,797
Number of Sequences: 438
Number of extensions: 3185
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)