Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2197
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X04393-1|CAA27981.1|  545|Homo sapiens complement C8-beta propet...    30   6.8  
M16973-1|AAA51862.1|  591|Homo sapiens C8B protein.                    30   6.8  
BC130575-1|AAI30576.1|  591|Homo sapiens complement component 8,...    30   6.8  
AY957526-1|AAX57550.1|  128|Homo sapiens anti-oxLDL immunoglobul...    30   6.8  
AL833902-1|CAD38758.1|  545|Homo sapiens hypothetical protein pr...    30   6.8  
AL121998-1|CAC18532.1|  591|Homo sapiens complement component 8,...    30   6.8  
AK000407-1|BAA91144.1|  310|Homo sapiens protein ( Homo sapiens ...    30   6.8  
AF525164-1|AAQ08897.1|  524|Homo sapiens DERPC protein.                30   6.8  

>X04393-1|CAA27981.1|  545|Homo sapiens complement C8-beta propetide
           /map='1p36.2- p22.1'on) protein.
          Length = 545

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 320 GLTKESNRGCEIPPPNTGGNPC 255
           G  K   R C  PPP  GG+PC
Sbjct: 513 GRRKTRQRQCNNPPPQNGGSPC 534


>M16973-1|AAA51862.1|  591|Homo sapiens C8B protein.
          Length = 591

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 320 GLTKESNRGCEIPPPNTGGNPC 255
           G  K   R C  PPP  GG+PC
Sbjct: 559 GRRKTRQRQCNNPPPQNGGSPC 580


>BC130575-1|AAI30576.1|  591|Homo sapiens complement component 8,
           beta polypeptide protein.
          Length = 591

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 320 GLTKESNRGCEIPPPNTGGNPC 255
           G  K   R C  PPP  GG+PC
Sbjct: 559 GRRKTRQRQCNNPPPQNGGSPC 580


>AY957526-1|AAX57550.1|  128|Homo sapiens anti-oxLDL immunoglobulin
           heavy chain variable region protein.
          Length = 128

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 90  LFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPTKST 227
           L +DDT VYY +R++ +I   +    L  G WF  W +    T S+
Sbjct: 86  LRSDDTAVYYCARSRPII---MGRGVLPPGHWFDLWGLGTLVTVSS 128


>AL833902-1|CAD38758.1|  545|Homo sapiens hypothetical protein
           protein.
          Length = 545

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +1

Query: 253 PHGFPPVLGGGISHPRLLSLVNPYPGPG---RSSTWALP 360
           P G  P   G +S PR   L+ P PGPG      T ALP
Sbjct: 120 PRGMNPTGTGAVSFPRPGGLLGPGPGPGPTLNPRTGALP 158


>AL121998-1|CAC18532.1|  591|Homo sapiens complement component 8,
           beta polypeptide protein.
          Length = 591

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -1

Query: 320 GLTKESNRGCEIPPPNTGGNPC 255
           G  K   R C  PPP  GG+PC
Sbjct: 559 GRRKTRQRQCNNPPPQNGGSPC 580


>AK000407-1|BAA91144.1|  310|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20400 fis, clone KAT00587. ).
          Length = 310

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +1

Query: 253 PHGFPPVLGGGISHPRLLSLVNPYPGPG---RSSTWALP 360
           P G  P   G +S PR   L+ P PGPG      T ALP
Sbjct: 99  PRGMNPTGTGAVSFPRPGGLLGPGPGPGPTLNPRTGALP 137


>AF525164-1|AAQ08897.1|  524|Homo sapiens DERPC protein.
          Length = 524

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +1

Query: 253 PHGFPPVLGGGISHPRLLSLVNPYPGPG---RSSTWALP 360
           P G  P   G +S PR   L+ P PGPG      T ALP
Sbjct: 99  PRGMNPTGTGAVSFPRPGGLLGPGPGPGPTLNPRTGALP 137


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,763,859
Number of Sequences: 237096
Number of extensions: 2465905
Number of successful extensions: 9463
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9463
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)