Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2190
(391 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 102 5e-22
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 102 5e-22
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 102 5e-22
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 102 5e-22
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 102 5e-22
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 102 5e-22
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 102 5e-22
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 100 1e-21
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 100 2e-21
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 97 2e-20
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 95 7e-20
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 49 6e-06
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 39 0.007
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 102 bits (244), Expect = 5e-22
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKDKAIKKFVIRNIV AAAVRDI++ASV+ + LPKLY KLHYCVSCAIHSK + +
Sbjct: 29 CVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 19 GRAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
GRAK GRGHV+ +RCT CAR K + +K
Sbjct: 9 GRAKKGRGHVQPIRCTNCARCVPKDKAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 102 bits (244), Expect = 5e-22
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKDKAIKKFVIRNIV AAAVRDI++ASV+ + LPKLY KLHYCVSCAIHSK + +
Sbjct: 29 CVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 19 GRAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
GRAK GRGHV+ +RCT CAR K + +K
Sbjct: 9 GRAKKGRGHVQPIRCTNCARCVPKDKAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 102 bits (244), Expect = 5e-22
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKDKAIKKFVIRNIV AAAVRDI++ASV+ + LPKLY KLHYCVSCAIHSK + +
Sbjct: 29 CVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 19 GRAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
GRAK GRGHV+ +RCT CAR K + +K
Sbjct: 9 GRAKKGRGHVQPIRCTNCARCVPKDKAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 102 bits (244), Expect = 5e-22
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKDKAIKKFVIRNIV AAAVRDI++ASV+ + LPKLY KLHYCVSCAIHSK + +
Sbjct: 29 CVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 19 GRAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
GRAK GRGHV+ +RCT CAR K + +K
Sbjct: 9 GRAKKGRGHVQPIRCTNCARCVPKDKAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 102 bits (244), Expect = 5e-22
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKDKAIKKFVIRNIV AAAVRDI++ASV+ + LPKLY KLHYCVSCAIHSK + +
Sbjct: 29 CVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 19 GRAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
GRAK GRGHV+ +RCT CAR K + +K
Sbjct: 9 GRAKKGRGHVQPIRCTNCARCVPKDKAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 102 bits (244), Expect = 5e-22
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKDKAIKKFVIRNIV AAAVRDI++ASV+ + LPKLY KLHYCVSCAIHSK + +
Sbjct: 29 CVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 19 GRAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
GRAK GRGHV+ +RCT CAR K + +K
Sbjct: 9 GRAKKGRGHVQPIRCTNCARCVPKDKAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 102 bits (244), Expect = 5e-22
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKDKAIKKFVIRNIV AAAVRDI++ASV+ + LPKLY KLHYCVSCAIHSK + +
Sbjct: 29 CVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 19 GRAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
GRAK GRGHV+ +RCT CAR K + +K
Sbjct: 9 GRAKKGRGHVQPIRCTNCARCVPKDKAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 100 bits (240), Expect = 1e-21
Identities = 46/66 (69%), Positives = 54/66 (81%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKDKAIKKFVIRNIV AAAVRDI++ASV+ + LPKLY KLHYCVSC IHSK + +
Sbjct: 29 CVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCVIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +1
Query: 19 GRAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
GRAK GRGHV+ +RCT CAR K + +K
Sbjct: 9 GRAKKGRGHVQPIRCTNCARCVPKDKAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 100 bits (239), Expect = 2e-21
Identities = 46/66 (69%), Positives = 54/66 (81%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKD AIKKFVIRNIV AAAVRDI++ASV+ + LPKLY KLHYCVSCAIHSK + +
Sbjct: 29 CVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +1
Query: 19 GRAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
GRAK GRGHV+ +RCT CAR K +K
Sbjct: 9 GRAKKGRGHVQPIRCTNCARCVPKDNAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/66 (68%), Positives = 52/66 (78%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVP DKAIKKFVIRNIV AAAVRDI++ SV+ + LPKLY KLHYCVSCAIHSK + +
Sbjct: 29 CVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHSKVVRNRS 88
Query: 260 EERQKN 277
E K+
Sbjct: 89 REACKD 94
Score = 33.5 bits (73), Expect = 0.25
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 25 AKHGRGHVKAVRCTTCAR 78
AK GRGHV+ +RCT C R
Sbjct: 11 AKKGRGHVQPIRCTNCVR 28
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 95.1 bits (226), Expect = 7e-20
Identities = 44/66 (66%), Positives = 52/66 (78%)
Frame = +2
Query: 80 CVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKSCQEQI 259
CVPKD AIKKFVIRNIV AAAVRDI++ASV+ + LPKL KLHYCVSC IHSK + +
Sbjct: 29 CVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYVLPKLCVKLHYCVSCVIHSKVVRNRS 88
Query: 260 EERQKN 277
E +K+
Sbjct: 89 REARKD 94
Score = 38.7 bits (86), Expect = 0.007
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 22 RAKHGRGHVKAVRCTTCARVRAKGQGYQK 108
RAK GRGHV+ +RCT CAR K +K
Sbjct: 10 RAKKGRGHVQPIRCTNCARCVPKDNAIKK 38
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 81 SKVVRNRSREARKDRTPP 98
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 48.8 bits (111), Expect = 6e-06
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +2
Query: 179 FQLPKLYAKLHYCVSCAIHSKSCQEQIEERQKN 277
+ LPKLY KLHYCVSCAIHSK + + E +K+
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKD 33
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +3
Query: 237 AKVVRNRSKKDRRIRTPP 290
+KVVRNRS++ R+ RTPP
Sbjct: 20 SKVVRNRSREARKDRTPP 37
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 38.7 bits (86), Expect = 0.007
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +2
Query: 107 KFVIRNIVXAAAVRDINDASVY 172
KFVIRNIV AAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,486,576
Number of Sequences: 237096
Number of extensions: 978826
Number of successful extensions: 2284
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2284
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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