Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2178
         (569 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018152-1|AAH18152.1|  204|Homo sapiens PNO1 protein protein.        216   5e-56
BC008304-1|AAH08304.1|  252|Homo sapiens partner of NOB1 homolog...   216   5e-56
AK223118-1|BAD96838.1|  248|Homo sapiens putatative 28 kDa prote...   216   5e-56
AF349314-1|AAK29434.1|  252|Homo sapiens RNA-binding protein LOC...   216   5e-56
AF164799-1|AAF80763.1|  252|Homo sapiens putatative 28 kDa prote...   216   5e-56
AC017083-2|AAY14714.1|  252|Homo sapiens unknown protein.             216   5e-56

>BC018152-1|AAH18152.1|  204|Homo sapiens PNO1 protein protein.
          Length = 204

 Score =  216 bits (527), Expect = 5e-56
 Identities = 105/168 (62%), Positives = 128/168 (76%)
 Frame = +1

Query: 1   RYTPLKESWLKILPRLLNTYCYK*GFNTKTRNVEIKVGPEXKDIANLQKAADFVKAFIYG 180
           RYTPLKE+W+KI   ++     +  FN K+RNVEI+   E KD++ L KAADFVKAFI G
Sbjct: 36  RYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILG 95

Query: 181 FEVXXXXXXXXXXXXFVESFEVKDVKPLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRIV 360
           F+V            F+ESFE+ DVKPL GDHLSRAIGR+AGK G+TKFTIENVT+TRIV
Sbjct: 96  FQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIV 155

Query: 361 LADSKIHILGSYQNIALARRAICNLIMGSPPSKVTGILRNVATRVAER 504
           LAD K+HILGS+QNI +AR AICNLI+G+PPSKV G +R VA+R A+R
Sbjct: 156 LADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 203


>BC008304-1|AAH08304.1|  252|Homo sapiens partner of NOB1 homolog
           (S. cerevisiae) protein.
          Length = 252

 Score =  216 bits (527), Expect = 5e-56
 Identities = 105/168 (62%), Positives = 128/168 (76%)
 Frame = +1

Query: 1   RYTPLKESWLKILPRLLNTYCYK*GFNTKTRNVEIKVGPEXKDIANLQKAADFVKAFIYG 180
           RYTPLKE+W+KI   ++     +  FN K+RNVEI+   E KD++ L KAADFVKAFI G
Sbjct: 84  RYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILG 143

Query: 181 FEVXXXXXXXXXXXXFVESFEVKDVKPLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRIV 360
           F+V            F+ESFE+ DVKPL GDHLSRAIGR+AGK G+TKFTIENVT+TRIV
Sbjct: 144 FQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIV 203

Query: 361 LADSKIHILGSYQNIALARRAICNLIMGSPPSKVTGILRNVATRVAER 504
           LAD K+HILGS+QNI +AR AICNLI+G+PPSKV G +R VA+R A+R
Sbjct: 204 LADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 251


>AK223118-1|BAD96838.1|  248|Homo sapiens putatative 28 kDa protein
           variant protein.
          Length = 248

 Score =  216 bits (527), Expect = 5e-56
 Identities = 105/168 (62%), Positives = 128/168 (76%)
 Frame = +1

Query: 1   RYTPLKESWLKILPRLLNTYCYK*GFNTKTRNVEIKVGPEXKDIANLQKAADFVKAFIYG 180
           RYTPLKE+W+KI   ++     +  FN K+RNVEI+   E KD++ L KAADFVKAFI G
Sbjct: 80  RYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILG 139

Query: 181 FEVXXXXXXXXXXXXFVESFEVKDVKPLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRIV 360
           F+V            F+ESFE+ DVKPL GDHLSRAIGR+AGK G+TKFTIENVT+TRIV
Sbjct: 140 FQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIV 199

Query: 361 LADSKIHILGSYQNIALARRAICNLIMGSPPSKVTGILRNVATRVAER 504
           LAD K+HILGS+QNI +AR AICNLI+G+PPSKV G +R VA+R A+R
Sbjct: 200 LADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 247


>AF349314-1|AAK29434.1|  252|Homo sapiens RNA-binding protein
           LOC56902 protein.
          Length = 252

 Score =  216 bits (527), Expect = 5e-56
 Identities = 105/168 (62%), Positives = 128/168 (76%)
 Frame = +1

Query: 1   RYTPLKESWLKILPRLLNTYCYK*GFNTKTRNVEIKVGPEXKDIANLQKAADFVKAFIYG 180
           RYTPLKE+W+KI   ++     +  FN K+RNVEI+   E KD++ L KAADFVKAFI G
Sbjct: 84  RYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILG 143

Query: 181 FEVXXXXXXXXXXXXFVESFEVKDVKPLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRIV 360
           F+V            F+ESFE+ DVKPL GDHLSRAIGR+AGK G+TKFTIENVT+TRIV
Sbjct: 144 FQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIV 203

Query: 361 LADSKIHILGSYQNIALARRAICNLIMGSPPSKVTGILRNVATRVAER 504
           LAD K+HILGS+QNI +AR AICNLI+G+PPSKV G +R VA+R A+R
Sbjct: 204 LADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 251


>AF164799-1|AAF80763.1|  252|Homo sapiens putatative 28 kDa protein
           protein.
          Length = 252

 Score =  216 bits (527), Expect = 5e-56
 Identities = 105/168 (62%), Positives = 128/168 (76%)
 Frame = +1

Query: 1   RYTPLKESWLKILPRLLNTYCYK*GFNTKTRNVEIKVGPEXKDIANLQKAADFVKAFIYG 180
           RYTPLKE+W+KI   ++     +  FN K+RNVEI+   E KD++ L KAADFVKAFI G
Sbjct: 84  RYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILG 143

Query: 181 FEVXXXXXXXXXXXXFVESFEVKDVKPLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRIV 360
           F+V            F+ESFE+ DVKPL GDHLSRAIGR+AGK G+TKFTIENVT+TRIV
Sbjct: 144 FQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIV 203

Query: 361 LADSKIHILGSYQNIALARRAICNLIMGSPPSKVTGILRNVATRVAER 504
           LAD K+HILGS+QNI +AR AICNLI+G+PPSKV G +R VA+R A+R
Sbjct: 204 LADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 251


>AC017083-2|AAY14714.1|  252|Homo sapiens unknown protein.
          Length = 252

 Score =  216 bits (527), Expect = 5e-56
 Identities = 105/168 (62%), Positives = 128/168 (76%)
 Frame = +1

Query: 1   RYTPLKESWLKILPRLLNTYCYK*GFNTKTRNVEIKVGPEXKDIANLQKAADFVKAFIYG 180
           RYTPLKE+W+KI   ++     +  FN K+RNVEI+   E KD++ L KAADFVKAFI G
Sbjct: 84  RYTPLKENWMKIFTPIVEHLGLQIRFNLKSRNVEIRTCKETKDVSALTKAADFVKAFILG 143

Query: 181 FEVXXXXXXXXXXXXFVESFEVKDVKPLNGDHLSRAIGRLAGKAGRTKFTIENVTKTRIV 360
           F+V            F+ESFE+ DVKPL GDHLSRAIGR+AGK G+TKFTIENVT+TRIV
Sbjct: 144 FQVEDALALIRLDDLFLESFEITDVKPLKGDHLSRAIGRIAGKGGKTKFTIENVTRTRIV 203

Query: 361 LADSKIHILGSYQNIALARRAICNLIMGSPPSKVTGILRNVATRVAER 504
           LAD K+HILGS+QNI +AR AICNLI+G+PPSKV G +R VA+R A+R
Sbjct: 204 LADVKVHILGSFQNIKMARTAICNLILGNPPSKVYGNIRAVASRSADR 251


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,963,459
Number of Sequences: 237096
Number of extensions: 1116779
Number of successful extensions: 1398
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1392
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)