Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-2152
(696 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 30 0.018
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 30 0.018
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 30 0.018
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 30 0.018
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 30 0.018
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 26 0.30
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 26 0.30
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 26 0.30
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 26 0.30
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 24 1.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 3.7
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 3.7
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 3.7
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 3.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 3.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 3.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 3.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 3.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 6.4
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 6.4
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 30.3 bits (65), Expect = 0.018
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S IH N+NNY +Y N+N
Sbjct: 80 KIISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 30.3 bits (65), Expect = 0.018
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S IH N+NNY +Y N+N
Sbjct: 80 KIISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 30.3 bits (65), Expect = 0.018
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S IH N+NNY +Y N+N
Sbjct: 80 KIISSLSNKTIHNNNNNYKKLQYYNIN 106
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 30.3 bits (65), Expect = 0.018
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S IH N+NNY +Y N+N
Sbjct: 80 KIISSLSNKTIHNNNNNYKKLQYYNIN 106
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 30.3 bits (65), Expect = 0.018
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S IH N+NNY +Y N+N
Sbjct: 313 KIISSLSNKTIHNNNNNYKKLQYYNIN 339
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.30
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLNVNR 458
+I++S+S + ++N+NNY Y N N +
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNYKK 109
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.30
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLNVNR 458
+I++S+S + ++N+NNY Y N N +
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNYKK 109
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.30
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLNVNR 458
+I++S+S + ++N+NNY Y N N +
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNYKK 109
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 26.2 bits (55), Expect = 0.30
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLNVNR 458
+I++S+S + ++N+NNY Y N N +
Sbjct: 80 KIISSLSNNYKYSNYNNYNNNNYNNNNYKK 109
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 100 VGSCATTPPARASFVGRQGAPRAGEVGFDSKGL 2
VGS T P + G P E+GFD++GL
Sbjct: 193 VGSAYT--PLKEDHDDHYGVPTLEELGFDTEGL 223
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S + + N+NN Y N+N
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYYNIN 106
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S + + N+NN Y N+N
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYYNIN 106
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S + + N+NN Y N+N
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYYNIN 106
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S + + N+NN Y N+N
Sbjct: 80 KIISSLSNNYNYNNYNNNYKPLYYNIN 106
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S + + N+NN Y N+N
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYYNIN 339
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S + + N+NN Y N+N
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYYNIN 339
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S + + N+NN Y N+N
Sbjct: 313 KIISSLSNNYNYNNYNNNYKPLYYNIN 339
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = -3
Query: 547 QILNSISETWIHTNHNNY**XKYQNLN 467
+I++S+S + + N+NN Y N+N
Sbjct: 302 KIISSLSNNYNYNNYNNNYKPLYYNIN 328
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 586 YNSFFTSSYLYYNYIS 633
YN+ + S LYYN I+
Sbjct: 314 YNNNYNSKKLYYNIIN 329
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 586 YNSFFTSSYLYYNYIS 633
YN+ + S LYYN I+
Sbjct: 325 YNNNYNSKKLYYNIIN 340
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,204
Number of Sequences: 438
Number of extensions: 2986
Number of successful extensions: 26
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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