Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2121
         (500 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M16696-1|AAA51764.1|  189|Homo sapiens APOD protein.                   38   0.020
J02611-1|AAB59517.1|  189|Homo sapiens APOD protein.                   38   0.020
CR541773-1|CAG46572.1|  189|Homo sapiens APOD protein.                 38   0.020
CR456838-1|CAG33119.1|  189|Homo sapiens APOD protein.                 38   0.020
BT019861-1|AAV38664.1|  189|Homo sapiens apolipoprotein D protein.     38   0.020
BT019860-1|AAV38663.1|  189|Homo sapiens apolipoprotein D protein.     38   0.020
BC007402-1|AAH07402.1|  189|Homo sapiens apolipoprotein D protein.     38   0.020

>M16696-1|AAA51764.1|  189|Homo sapiens APOD protein.
          Length = 189

 Score = 37.9 bits (84), Expect = 0.020
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 84  EVIHEGTCPDLXPVNNFTLTAYQGIWYEISKFPT 185
           +  H G CP+     NF +  Y G WYEI K PT
Sbjct: 21  QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54


>J02611-1|AAB59517.1|  189|Homo sapiens APOD protein.
          Length = 189

 Score = 37.9 bits (84), Expect = 0.020
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 84  EVIHEGTCPDLXPVNNFTLTAYQGIWYEISKFPT 185
           +  H G CP+     NF +  Y G WYEI K PT
Sbjct: 21  QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54


>CR541773-1|CAG46572.1|  189|Homo sapiens APOD protein.
          Length = 189

 Score = 37.9 bits (84), Expect = 0.020
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 84  EVIHEGTCPDLXPVNNFTLTAYQGIWYEISKFPT 185
           +  H G CP+     NF +  Y G WYEI K PT
Sbjct: 21  QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54


>CR456838-1|CAG33119.1|  189|Homo sapiens APOD protein.
          Length = 189

 Score = 37.9 bits (84), Expect = 0.020
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 84  EVIHEGTCPDLXPVNNFTLTAYQGIWYEISKFPT 185
           +  H G CP+     NF +  Y G WYEI K PT
Sbjct: 21  QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54


>BT019861-1|AAV38664.1|  189|Homo sapiens apolipoprotein D protein.
          Length = 189

 Score = 37.9 bits (84), Expect = 0.020
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 84  EVIHEGTCPDLXPVNNFTLTAYQGIWYEISKFPT 185
           +  H G CP+     NF +  Y G WYEI K PT
Sbjct: 21  QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54


>BT019860-1|AAV38663.1|  189|Homo sapiens apolipoprotein D protein.
          Length = 189

 Score = 37.9 bits (84), Expect = 0.020
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 84  EVIHEGTCPDLXPVNNFTLTAYQGIWYEISKFPT 185
           +  H G CP+     NF +  Y G WYEI K PT
Sbjct: 21  QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54


>BC007402-1|AAH07402.1|  189|Homo sapiens apolipoprotein D protein.
          Length = 189

 Score = 37.9 bits (84), Expect = 0.020
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 84  EVIHEGTCPDLXPVNNFTLTAYQGIWYEISKFPT 185
           +  H G CP+     NF +  Y G WYEI K PT
Sbjct: 21  QAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPT 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,182,875
Number of Sequences: 237096
Number of extensions: 808353
Number of successful extensions: 806
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)