Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-2092
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   5.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   5.3  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 738 LNCSQYLTFFKVQGE 694
           L C +YL FFK+ G+
Sbjct: 396 LKCLEYLFFFKMIGD 410


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 6/39 (15%)
 Frame = +3

Query: 579 KCFSDTETLCND------NKFKCDNCSSYXEAXKRMRVE 677
           K   D + L ND      +  KCD CS+Y    + + +E
Sbjct: 128 KSLDDVKILRNDRIDSYKSNLKCDKCSTYQSNGEEVCLE 166


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 738 LNCSQYLTFFKVQGE 694
           L C +YL FFK+ G+
Sbjct: 396 LKCLEYLFFFKMIGD 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,247
Number of Sequences: 438
Number of extensions: 3671
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)